Paenibacillus polymyxa SQR-21: PPSQR21_002910
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Entry
PPSQR21_002910 CDS
T03178
Name
(GenBank) LacI family transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppq03000
]
PPSQR21_002910
Transcription factors [BR:
ppq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PPSQR21_002910
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_IclR
HTH_AraC
HTH_23
HTH_38
HTH_Tnp_ISL3
HTH_Crp_2
HTH_26
HTH_5
MarR_2
HTH_6
HTH_10
Sigma70_r4
HTH_29
HTH_17
AP5B1_barrel
Motif
Other DBs
NCBI-ProteinID:
AHM64002
LinkDB
All DBs
Position
339132..340154
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AA seq
340 aa
AA seq
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MNKTIADIAQMAGVSKSTVSRFLNGGSVSLDTKRKIEKVVKATGYVPNTFAQSLKAKRTN
IIGTVVPRLDSFATSHTLMGIDEELRSQHYQMLISNTSQDVKREIEAIYEFARQKISGII
LLAAQITDDHLTAIRDISIPVLLVGQQHEQIHSLIHDDYRAGYDIGAYVLSQGHREIAYV
GVTERDVAVGVQRKEGFRQAVRDALSATCYTDEAMRAAGYDIRYYETGFKMSDARIAASA
ILDQFKPSLMVCATDNIALGVINAAYSRGITIPSDLSVTGFGGYDITEVIHPALTTVQYP
YMEAGRVAAQNIVRLVEHKTVEQVTVMDYTLIERESVDKR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacaattgcagatatagcccaaatggctggtgtatccaagagcaccgtatcc
cgttttttgaacggcggatctgtcagcctggacactaagcgtaaaattgaaaaggtggtt
aaggccacggggtatgtgcccaatacctttgcccaaagtttgaaggcaaaacgaaccaac
attatcggaaccgtcgtgccacggctggattcctttgcgacatcccatacgttaatgggg
attgatgaggagctgcgttcccaacattaccagatgctgatctctaatacgagtcaggat
gtaaagcgtgaaatcgaagcgatctatgagttcgcacgacaaaaaatttcaggcatcatt
ctgctggctgctcaaattacagacgaccacctgaccgcgattcgagacatcagtattccg
gtattgctggtaggccaacaacatgagcagatccatagccttatccatgatgattatcgt
gccggatatgatatcggtgcatatgtcctgtcacagggccaccgtgaaattgcctatgtc
ggtgttactgaaagggacgttgctgtcggtgtgcagcgcaaagagggctttaggcaggct
gttcgcgatgcgttatctgctacgtgttatacggacgaggcgatgcgagccgcaggatat
gatatcaggtactatgaaaccgggtttaaaatgtccgatgcacggattgctgcatctgcc
atcttagaccaattcaagccatcgttgatggtgtgtgctacggataatatcgcgcttggg
gtaatcaacgcggcttattccagaggaattaccattccgtcggatttgtcggtcactggc
tttgggggatacgatattacggaggtcattcaccctgcgctaacaactgttcaatacccg
tatatggaggctggacgtgtagcagcccaaaacattgtacggctggtagaacataaaacg
gtagagcaagttacggtcatggattatacccttattgaaagagaaagcgttgacaaacgc
tga
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