Paenibacillus polymyxa SQR-21: PPSQR21_003220
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Entry
PPSQR21_003220 CDS
T03178
Name
(GenBank) alpha-L-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00520
Amino sugar and nucleotide sugar metabolism
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PPSQR21_003220
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
PPSQR21_003220
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Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_39
ASD1_dom
Motif
Other DBs
NCBI-ProteinID:
AHM64033
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Position
374648..376162
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AA seq
504 aa
AA seq
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MAAAVKAKMIVDKSFRIAEVDKRIYGSFVEHLGRAVYGGIYEPTHSTSDESGFRNDVKEL
VKELDVPIIRYPGGNFVSGYNWEDGVGPVASRPRQLELAWRTVEPNEVGTNEFFKWAQDV
GSEVMMAVNLGTRGIDAARNLVEYCNHPGGSYWSDLRRSHGVEQPHKIKTWCLGNEMDGP
WQIGHKTAEEYGRLAVESAKAMRLIDPDIELVSCGSSSSTMPTFPEWEATTLDHTYEVAD
YISLHQYYGNHDNDTANYLARSMDMDHFIRTVISTCDYIKAKKRSKKKMMLSFDEWNVWY
HSNDADKKIDPWSVAPPQLEDIYNFEDALLVGSMLITFLRHADRVKMACMAQLVNVIAPI
MTENNGKAWKQTIFYPYLHASRYGRGISLMPVVDSEKYDSKDFTDIPYLDSAVVYDEEGD
ALTVFAVNRHLSESLELTVDVRSFEGYRIVEHTVLEHDDLKATNSPAGEKVTPHNGGNAK
LEDGIVKAHLGKASWNVIRLAKSH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcagctgtaaaagcaaagatgatcgtagacaagtcttttcgtattgctgaagtc
gataaacgcatttatggttcttttgtagagcacctcgggcgtgctgtatatggtggtatt
tatgagcctactcattcaactagtgatgaaagcggtttccgtaatgatgttaaagaactg
gtaaaagaactagatgttcctattatacgctatccgggcggtaattttgtatccggttac
aattgggaggacggcgttggccctgtcgcatccagacctagacagttagagctggcgtgg
agaacggtcgaaccgaatgaagtagggacgaatgaattttttaaatgggcccaggatgtt
ggctccgaagtaatgatggcggtgaatctgggtacgcgtggtattgatgcggcacgtaat
ctggtggaatattgtaaccatccaggtggctcctattggagtgatttacgtcgtagtcac
ggtgtagagcagccacataagattaaaacctggtgtcttggcaatgagatggacggtcca
tggcagattggtcacaagacagcagaggaatatggtcgtctggctgtagaatctgcaaaa
gctatgaggctgattgaccctgacattgaacttgtatcctgtggaagctccagctccacg
atgccgacgttcccggaatgggaggcaaccacactggatcatacgtatgaggtagctgac
tatatttccctgcaccaatactacggcaaccatgacaatgatacggctaattatctggca
cgttctatggacatggatcattttattcgtacagtcatttcgacttgtgattatatcaaa
gcgaagaaacgcagcaagaaaaaaatgatgctcagctttgacgaatggaatgtgtggtac
cactccaatgatgcggacaaaaaaattgatccatggtctgtggcaccaccgcagcttgag
gatatttacaactttgaagatgcattgttggtcggcagcatgttgattacgttcctgcgt
cacgcagaccgtgtaaaaatggcttgtatggctcaactggtcaacgttattgcaccaatc
atgaccgaaaataacggaaaagcgtggaagcaaacgatcttctatccgtatctgcatgcc
tcccgttatggtcgtgggatatcgctgatgcctgtagtggactccgaaaaatacgactcc
aaagactttacagatattccttatctggatagcgctgtagtttatgatgaagagggagac
gcgctgacggtctttgcagtgaaccgtcacttgtctgaatcgctggagctgacggtagat
gtacgcagttttgagggttaccgcattgtcgagcatactgtactggagcatgatgatctc
aaagcgaccaacagcccagctggtgaaaaggttacacctcataacggtggcaatgccaag
cttgaagacggaattgtaaaagcccatttgggtaaagcctcgtggaacgtgatccgtctt
gctaagtctcattaa
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