Paenibacillus polymyxa SQR-21: PPSQR21_004010
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Entry
PPSQR21_004010 CDS
T03178
Name
(GenBank) LysR family transcriptional regulator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppq03000
]
PPSQR21_004010
Transcription factors [BR:
ppq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PPSQR21_004010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AHM64085
LinkDB
All DBs
Position
450560..451519
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AA seq
319 aa
AA seq
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MIRSRASFDLSMQTFLDFRRERRKTEIRQLQYFIAVCEELHFTKASEKIGISQPTLSLQI
KALEEELGMTLFDRAGKKIKMTDAGKLLLQHSAHALKGLQQAKASIEELRTEQRGSLRIG
IALPELEEPLQKMLAHFHRSFPKISLHICPFFDVTEQLLDNRVDVGITLHSGTDERLVRL
PLRTENYCLIVPVNHAFSNRSSIMLDELRHVPWAMQPECHPGRKLIEKCFSDRGYPFATV
LETNSIASILRWVQEGLAVTLQTKSLAAELDRSHFCTVPILRGAPQGQLELIYRSDRYQG
EAVKRLIDKIQAVLTERSN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatctcgcgcttcttttgacctgtccatgcaaacattcttggattttcgaagg
gagagaaggaagacggaaatacgtcagcttcaatacttcattgccgtatgcgaggaactg
cattttacgaaggcttcggaaaagatcggaatctctcaacccacacttagcttacaaatt
aaggcgctggaggaggaactgggcatgacgctctttgaccgcgcaggcaagaaaattaaa
atgacagatgccggtaaactgctgctacaacacagtgcccatgcgctcaagggattacag
caagcaaaggcatccattgaggagctgcgtaccgagcaacgcggaagtttacggattggt
atcgcattacctgagctggaggagcctttgcaaaagatgcttgcccattttcatcggtca
tttcctaaaatcagcttgcacatctgcccattctttgatgtaacagaacagctgctggat
aaccgtgtggatgttggcatcaccctacactcgggtacagatgaaaggcttgtccggctt
ccgctccgcacagagaactactgtcttattgtcccggtaaaccatgcattttccaaccgt
tcttccattatgctggacgaattgaggcatgtaccctgggcgatgcagccagaatgccat
cccggtaggaagctgattgagaaatgctttagtgatcgcgggtatccctttgcaaccgtc
ttggaaactaattctatagcttcaatcctgcgctgggtgcaggagggacttgccgtaacc
ttacagacgaagtcccttgcggccgaactggatcgttcgcatttttgcacggtgcctatt
ttgcgtggtgcgcctcaaggtcagctagagttgatttatcgatctgaccgttaccaggga
gaagcagtgaaacgattgatagataagatacaagctgtgctgacagagcgctccaactaa
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