Paenibacillus polymyxa SQR-21: PPSQR21_005860
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Entry
PPSQR21_005860 CDS
T03178
Symbol
galA
Name
(GenBank) glycoside hydrolase clan gh-d
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00052
Galactose metabolism
ppq00561
Glycerolipid metabolism
ppq00600
Sphingolipid metabolism
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PPSQR21_005860 (galA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
PPSQR21_005860 (galA)
00600 Sphingolipid metabolism
PPSQR21_005860 (galA)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
PPSQR21_005860 (galA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Glyco_hydro_31_2nd
Melibiase_2
GHL10
Motif
Other DBs
NCBI-ProteinID:
AHM64249
LinkDB
All DBs
Position
642172..644355
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AA seq
727 aa
AA seq
DB search
MGIIVQEQPGLFHLQSSGMSYIIQIVDGFPVHVYWGDRLKHREPMADLLLHTPATAGLDR
LPQEYPQYGSGDFRTPAYQVELEDGTRITELKYDGYRIIKGKPSLPGLPAVYTENEAEAD
TLELELKDAFSGLKVVLLYTVFADRNVIARSARLSNAGEQNLRLLRALSASVDFAGKSDL
EFMYLSGAWAREGNITRKPILQGETRIDSKRGMSSHQLNPFTALVTQETTESQGEAFGFS
LVYSGGFEAGAELDSFGSTRFSIGVNSFDFSWLLNPGESFQTPEAVMVYSGQGLGEMSRT
YHRLYRTRLCRGTYRDEERPILVNNWEATYFDFNADKLVSIAKEGAELGIELFVLDDGWF
GKRDSDNSSLGDWYEDRRKLPDGLADVAKRINQLGLKFGLWFEPEMISPDSELYRKHPDW
CLHVPGRRRSEARWQLVLDYTRKEVRDYIYDSLAAIFSSAPVSYVKWDMNRCLTEIGSAD
LPPERQSETAHRYVLGLYELLERVTTEFPHILFESCSSGGGRFDPGMLYYMPQVWTSDNT
DAVERLKIQYGTSLVYPVSAIGAHVSAVPNHQVGRITPLDFRGDVAMSGNFGYELDLTKF
TDEEKETVKRQVTAYKQIRGLVQKGDLYRLKSPFEHNESAWMFVSEDQEDAIVYYFQVMA
VPNAPWRALRLDGLNPELEYEVQSGNSGQKSIHGGDRLMKLGLPLVYRQKDYESGWFRLR
AIRSSKA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcattgttcaagaacaaccggggctgtttcatttgcagtcgtcgggcatgagt
tatattattcagattgtcgatggatttcctgtgcatgtatactggggagacaggttgaag
caccgtgagcccatggctgatctattgcttcacactcccgcgacggctggattagatcgg
ctgccgcaagaatacccgcagtatgggagtggagacttccgtacaccggcgtatcaagta
gagcttgaggatggaacacgcatcacggagttaaagtacgatggttaccggatcattaag
ggaaagccatctttacccgggcttccggccgtttataccgagaatgaagccgaagcggat
acgttggaactggaattaaaagatgccttttcaggtcttaaagtggttcttctttacacc
gtcttcgcggatcgaaacgtaatcgctcgttcggctcgtctaagtaatgcgggggaacaa
aatcttcgactcctccgcgcgctaagtgccagtgtcgatttcgcgggaaaaagcgattta
gagttcatgtatctttcgggagcatgggcacgggaagggaatattacccgcaaaccgatt
cttcaaggtgaaacccgaattgatagtaaaagaggcatgagcagccatcagcttaatcct
tttactgcattagtcacgcaggagaccacggaaagccagggtgaggcattcggctttagc
cttgtgtacagcggaggctttgaggcgggagcagaattagattcatttggctctacacgg
tttagcattggcgtaaactcgtttgacttttcatggttactgaatccaggggagagcttc
caaacgccagaagccgttatggtttattccggtcaaggactgggagaaatgtcgcgtaca
tatcatcgcttgtatcggactcggctttgccgagggacatatagggatgaagaacgccct
attctggtcaataactgggaagctacctattttgacttcaatgcggataagttggtatcg
atagccaaagagggggctgagctaggcatcgaactttttgtcttggatgatggttggttc
ggcaaacgggattctgacaattcgtctctcggtgattggtacgaagatcgccggaagctg
ccagacggactggccgatgttgccaaacgtatcaatcaattggggcttaaattcgggctc
tggttcgagccggaaatgatctctccagacagcgaattgtaccgcaagcatccagactgg
tgtcttcacgttccaggacggcggcgtagcgaagccagatggcagttggtactggactat
actcgcaaggaagtgcgcgattacatctacgattcgctggctgccattttctccagcgct
ccagtttcttacgtgaagtgggatatgaatcggtgcctgacggaaattggttccgctgat
ctgccaccggaacgccaatccgagactgcccatcgctatgttcttggattgtatgagctg
ttagagcgcgtcaccaccgaatttccgcatattctttttgagagctgctcaagtggtgga
ggacgttttgatccaggcatgctttactacatgcctcaagtctggactagtgataatacc
gatgcggtggaacgcctgaagattcaatatggaactagccttgtctatcccgtaagtgcc
atcggagcccatgtgtcggccgttccgaaccatcaagttggacgcataacgccccttgat
tttcgaggtgatgtcgccatgtctggaaattttggatatgagcttgatctcacgaaattt
actgatgaggaaaaagagacggttaaacgtcaagtcacagcatacaagcagattcgtggc
ttagtacagaagggtgacttgtatcgcttaaagagtccgtttgaacataacgagtcggct
tggatgtttgtttccgaagaccaagaggatgccatcgtctactatttccaagtgatggct
gttccgaatgcaccttggcgagccctgcgccttgacggactgaatccagaactcgaatat
gaagttcagtctggaaatagcgggcaaaagtctatccatgggggggataggcttatgaag
ttgggcctccctcttgtctatagacagaaagactatgaaagtggatggttcaggcttcgg
gccataaggtccagcaaggcttag
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