Paenibacillus polymyxa SQR-21: PPSQR21_005920
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Entry
PPSQR21_005920 CDS
T03178
Symbol
manB
Name
(GenBank) beta-mannanase
KO
K01218
mannan endo-1,4-beta-mannosidase [EC:
3.2.1.78
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00051
Fructose and mannose metabolism
ppq01100
Metabolic pathways
ppq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
PPSQR21_005920 (manB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSQR21_005920 (manB)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.78 mannan endo-1,4-beta-mannosidase
PPSQR21_005920 (manB)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_26
CBM_35
CBM_35_2
Motif
Other DBs
NCBI-ProteinID:
AHM64255
LinkDB
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Position
complement(651764..653734)
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AA seq
656 aa
AA seq
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MPDPWKKRFFSILSFVLLSFLLVSLGLIPSLAKAESTHLVTDVEDRTLMNASQDSSTNDN
SSSIVVSSKDAILQGYGVEKRDTPYTGDTLYKGDGYVSFFYDYDPNSGKSDGTATFKVNV
PTAGLYRLSLGYYIPAGTGSKDTSIEVNGTMSENITLAAPPKGAAVNEKILTKIMLNAGT
NELTFARGWGYYGIEYVKVEFANLPAAISKIEAEDGVITGEVKIEAADTGYSGSGYAAFK
STGSLTFAYNAPSSGLYNLAIGYSNPNGDKKTQLVVNGQTSEISLPTTASYTEVSGGKLM
LNSGNNILQFNVDSDQYHIDYVKLSAVSPPKLHQIEKKPVNPNATAETTALMGYLVDSYG
SHILSGQHTLEDAQWIKDQTGKYPAMLSMDMMDYSPSRIEHGATSTEVEKAIQWAQEGGL
VTFAWHWNAPKGLYDIPGKEWWRGFYTDATTFDVQYALSHPESEEYQLILRDIDAIAAQL
KRLQDAHVPVLWRPLHEAEGKWFWWGAQGPDSAKQLYRIMYDRLTHYHHLNNLIWVWNSE
SPDWYPGDDVVDIVSVDIYNQAANYSPSIGKYDSLVNLVQGKKLVGLSENGPISDPELLQ
TYSAHWLFFTTWTGDFIRNGKYNSLDHLIKVFNSDYVITRDELPQDLLTLSKNKAE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgccagatccatggaaaaaaaggtttttcagtattctcagttttgttctcttatccttt
ttgttggtatctctcggtttaattccaagcttagctaaagcagaatcaactcacttggtc
accgatgttgaagaccgaacgttgatgaatgcaagtcaagattcatccactaacgacaat
tcctcttctatcgtcgtcagctccaaagatgcaattcttcaaggttacggtgtagaaaaa
cgggataccccctataccggcgatacgctttataaaggcgatggctatgtatccttcttt
tatgactacgacccaaattccggcaagtccgacgggacggccacgtttaaagtgaacgtg
cctacagcaggtctttatagactgagcctcggctactacattccggcgggcactggctcc
aaggataccagcatcgaggtcaatggcacaatgtctgagaacataacgctggctgctcct
ccgaaaggtgcggcagtgaacgagaaaatattaaccaagatcatgctgaatgccggcaca
aacgagcttacttttgcaagaggctggggatattacgggatcgaatacgtgaaggttgaa
ttcgccaatctgcctgctgcaattagcaaaattgaagccgaagacggagtcattactggt
gaggtcaagatcgaagctgctgatacaggctattcgggtagcggttacgccgccttcaaa
agcacaggttcgttaacctttgcctataatgcaccttcaagcgggctttacaatcttgca
atcggttacagtaaccccaatggagacaaaaagacccaattggtggtcaacggccagacc
agcgaaatatcactgccgacaacagcaagctacacagaggtatccggcggtaaactgatg
ctgaattcgggaaacaatatcttacagttcaatgtcgactcggaccaatatcatatcgac
tacgtcaagctatcagcagtgtcccccccgaaactgcatcaaattgagaaaaagccagta
aacccgaatgcgactgcggaaaccacggcactcatgggttatctcgtggatagttacggc
agccacattctttccggtcagcacactttggaggatgcacagtggattaaagaccaaact
ggaaagtatcctgccatgttatcaatggacatgatggattattccccctctcgcatcgag
catggcgccacctcaactgaggtggaaaaggcaattcaatgggcccaagaaggtggactt
gtcacattcgcatggcactggaatgctcctaagggactgtatgatattcccggtaaagaa
tggtggcgcgggttttacacggacgctactacattcgacgttcaatatgcacttagtcat
cccgagtcggaagagtatcagcttatcctaagggatatcgatgccattgctgctcagttg
aaacgcctccaagacgctcacgttccggtgctgtggagaccgctgcacgaggcggagggc
aaatggttctggtggggcgcccaaggtccagactccgccaagcagctgtaccgtatcatg
tacgaccgcctaacacactaccatcacctgaacaacctgatctgggtatggaactccgag
agtcccgactggtatccaggggatgatgtcgtcgatattgtaagtgtggatatctacaac
caggcggctaattatagcccaagtattggcaagtacgacagtttggtaaatctcgtgcag
ggtaagaagctggttggtctgtctgaaaacggcccgattagcgatcccgaattgcttcaa
acatattcagcgcattggctctttttcactacgtggacgggcgacttcatccgcaatgga
aaatataactccctggatcatctcataaaagtgttcaacagcgattacgtgatcacgagg
gatgagcttcctcaagacctgcttactttatccaaaaataaagcggagtaa
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