Paenibacillus polymyxa SQR-21: PPSQR21_007630
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Entry
PPSQR21_007630 CDS
T03178
Name
(GenBank) iron-sulfur cluster binding protein
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_007630
Enzymes [BR:
ppq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
PPSQR21_007630
Transfer RNA biogenesis [BR:
ppq03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPSQR21_007630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Fer4_16
QueG_DUF1730
HEAT_2
Methyltransf_1N
HEAT_PBS
HEAT_EZ
Fer4_7
Fer4_10
Fer4
HEAT
Rbsn
Fer4_9
Arm
PSK_trans_fac
Fer4_6
GMT-wHTH
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
AHM64426
LinkDB
All DBs
Position
840821..842554
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AA seq
577 aa
AA seq
DB search
MQRELTRTATGTASTWASLKQEIIEAAPGLGIDSIGFASADPFLSLKAILEEHRAKGYES
GFEEPDIDKRIYPELYGSQPASLIAIAVAYPSKMKDPPKSDKGKYRGIMARSAWGKDYHL
VLREAMEKLEAFISERVPDALLKNMVDTGELSDRAVAERAGIGFSGKNTMMISPTLGSWI
YLGELLTNIPFQPDEPVTDGCGECTKCLDACPTGALVGPGQLNAQRCVSFLTQTKGFLDE
EFMLKIGNRLYGCDTCQIVCPKNRGLNWDHHPELTPDPEIVKPLLLPLLDLSNREFKDRF
GQSAAAWRGKKPIQRNAVIGLGNFKDVSAVPKLTEVLLDDPRPELRGTAAWALSRIGGEN
AMTAIKQASEKEQHEQVREMIAQAHSKLAEQEQAEQQTSAELKTEDSQGPTKIYYDEMET
PVGTLTLCATDRGLCRIDYGSFYAKEALLQQWARTWVGEYVYVQEPEKLREAAEQLREYF
AGERREFSIAYDLRGTPFQEQVWRALQNIPYGQSVSYQDIAESIGRAKAIRAVGEANNKN
PLPILFPCHRVSGANGSLVGYAGGLPVKMKLLDLEKE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgaactaactcggacggcgaccggaacggcttcgacttgggcttcgctcaag
caggaaattattgaggcagctccagggctggggattgattccatcgggttcgcatccgcc
gatccctttctgtctctgaaagctatattggaagagcaccgtgctaaaggctatgaatcc
ggctttgaggagcctgatattgataagcgtatctatccagagctgtatggctcgcagccc
gcatccctgattgccattgcggtggcgtatccttcgaaaatgaaggacccgccgaagtcg
gacaagggcaaataccgtggtattatggcgcgttcagcctggggcaaagattatcatctg
gtactgcgcgaagcgatggaaaagcttgaggcttttataagtgagcgggtacctgatgca
ctgttgaaaaacatggtggataccggagaattgtcggaccgagccgttgcggaacgcgca
ggaattggctttagcggcaaaaatacgatgatgatttcaccgacactggggtcatggatt
tatcttggggagctgttgacgaacattcccttccagcccgatgaaccggttacggatggt
tgcggagagtgcaccaaatgtttggatgcatgtcctaccggtgcgcttgtaggtccggga
cagctgaatgcccagcggtgtgtatcctttttaacgcaaaccaagggctttttggacgag
gagtttatgctgaaaatagggaatcggctgtatggatgtgatacgtgccaaatcgtatgt
cccaaaaatcgaggccttaactgggatcatcatcccgagcttacacccgatcctgaaatt
gtaaagccgttgctgttaccattactggatttgagcaatcgcgaattcaaagaccggttt
ggtcaaagtgcagcggcttggcgggggaagaagccgattcaacgcaatgcagtcattggt
cttggaaatttcaaggatgttagcgcggtgcccaaattgacggaggttttattggatgat
ccgcgtcccgagctgcgaggcacggcggcgtgggctttgagtcgaataggaggggaaaac
gctatgacagcgatcaagcaagcatcagagaaggaacaacatgagcaagtacgcgaaatg
atcgcgcaggcgcattccaagctagcggaacaagagcaggcagagcagcaaacttctgct
gaattaaagacggaggattcacagggtccaactaagatttattatgacgaaatggagacg
cctgtgggcactctgacgctgtgtgctacggatcgagggctatgccgaattgactatggc
tctttttatgcgaaggaagcattgcttcagcaatgggcccggacatgggtcggggaatat
gtctatgtacaggagccggaaaagctgcgcgaagctgcagaacaactgcgtgaatatttt
gcgggagaacgacgggaattcagtatagcctatgatttgagaggcactccttttcaagag
caggtatggcgcgcactgcaaaatattccgtacggacaaagtgtgtcctatcaagatatt
gcagaatcgattggacgagccaaggcgatacgtgctgtcggcgaagccaataacaaaaat
ccattgcctatcctgtttccatgccaccgtgtatcgggtgcaaacggtagtttggttggc
tatgccggaggcttgccagtcaaaatgaagctgctggatttggagaaggaataa
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