KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_008830
Entry
PPSQR21_008830    CDS       T03178                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme EcoKI subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppq02048]
    PPSQR21_008830 (hsdR)
Enzymes [BR:ppq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PPSQR21_008830 (hsdR)
Prokaryotic defense system [BR:ppq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PPSQR21_008830 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 Helicase_C DEAD HSDR_N DUF4145 SLFN-g3_helicase AAA_19 Strep_SA_rep DUF2452 SNF2-rel_dom AAA_34 nSTAND3 PhoH UvrD-helicase CYRIA-B_Rac1-bd SAM_Exu
Other DBs
NCBI-ProteinID: AHM64543
LinkDB
Position
972603..975848
AA seq 1081 aa
MASQNFNFLAPQWEVLDKVAETAERNIYQDPNTAISKIRTFAETMAKYISAFEEIREAHT
TTQDHRLKQFKYQQIVPREMIDLFHTIRQKGNNAVHNPAYGDTDEAKALLQMAFRLSVWF
MEVYGDWQFKAPAYQEPTEGSFISEAELVEITQTYEDKLAQMEEELERVRSEQLYVNGKD
KERRRKRSMRAGSNIQLTEEETRILIDQQLTEAGWEVDSKNLRFAQGARPEKGKNRAIAE
WPLKKGFADYALFVGLQFVGIIEAKRASKDIPSDIEQAKKYARLVVPNGDEQIFEPWGDY
FVPFLFATNGRPYLKQLEQKSGIWFLDARRSTNHPRALQYWFKPEEISILLTQNIEQAQQ
ALRDEKFDYLRLRPYQIKAIEKVEEALESNKKSVLLAMATGTGKTRMAIGLIYRLIKAKR
FNRILFLVDREALGEQAEAAFRDSKLESAHSFTEIYELKALKDKNPNPETKVHIATVQGM
LKRLFYSQSSDDKPGVAQYDCIIVDEAHRGYTLDKEMSELEIEIRDHADYVSKYRQVLEY
FDAAKIGLTATPALHTTEIFGPPVYTYTYSEAVIEGYLIDHEPPYQFDTLLKHNGITFDK
GAEVEVYDSVSGTLSQEYLEDELRIDITGFNKRVLTDSFNEVVVQELANYIAPDDDGKTL
IFAVTDDHADKLVNMLKHEYDQRYGSVEDSAIMKITGSIDDPLGAIRRFKNEHYPNIVVT
VDLLTTGIDVPKITNLVFMRRVKSRILYEQMLGRATRRCDEIGKDHFKIFDAVGLYESLK
DYTAMKPVVVNPKIPITQLVDELGHIPEGNDLKRYKEQILAKVQRKKHRFTASREENFKM
LADGRSIDAFISWVEQLEPNELQENLAPYVALFKYLDENQDGVNKAYHSNHQDEFLGVTR
GYGNADKPEDYLQGFGDYIRDNLNKIPALMIVCQRPTELTREELNKLRGELGQAGYTLQN
LQTAWREAKNEDITADIIAFIRQQALGDPLVSHEERVRNAMKKVYETKVWPPIQKKWLER
IEKQLLQEPVLGPDPEQAFNYEPFTSQGGYKQLDRIFSGQLNEIVKEINTNLYSYVKKEQ
A
NT seq 3246 nt   +upstreamnt  +downstreamnt
atggcatcgcaaaattttaactttttggctccacaatgggaagtacttgataaggtagcc
gaaacagcagaacgtaatatctatcaagatccgaatacggctatctccaaaatacgtaca
tttgctgaaactatggcaaagtatatctctgcgtttgaagaaattcgtgaggcacacacg
acaacacaagaccatcgcttgaaacaatttaaatatcagcaaatcgtaccgcgtgaaatg
atcgatttgtttcacaccattcgtcagaaagggaataatgctgttcataatccggcatat
ggtgatacggatgaagccaaagccctgctacagatggcatttcgattgtcagtatggttt
atggaggtatatggagactggcagtttaaagcaccggcttaccaagaacctactgaaggg
agttttatttcagaagctgaactagtagaaataacacagacctatgaagacaagcttgcc
caaatggaggaagaacttgaaagagttcgttctgaacaactatatgtaaatggaaaagat
aaggagcgaagacgtaaacgttctatgagggctggtagtaatattcagttaactgaagag
gaaacgcgcatactgattgatcaacagttaactgaggcaggctgggaagtggactccaaa
aatctgaggtttgctcaaggggcacggccagagaagggtaaaaatcgtgcgattgcggag
tggccgcttaagaaagggtttgctgattatgctttgtttgttggtttacagtttgttggt
atcattgaggccaaacgagcaagtaaagatatcccgtcagatatcgaacaagctaaaaag
tatgctcgacttgtcgttccaaatggagatgaacagattttcgagccttggggtgattat
tttgtcccatttctgtttgccaccaatggaagaccatacttaaagcagctagagcagaag
tcgggcatttggtttttggatgcccgccgttcaaccaatcatccacgagcacttcagtac
tggttcaaaccagaagaaatcagcattctattaacccaaaatattgaacaagcacagcaa
gcactccgtgatgagaaattcgattatttacgcctccgtccttaccagattaaagccatt
gaaaaggtcgaggaagctttagaatccaataagaaaagtgtgttactggccatggcaaca
ggaacgggcaagacacgaatggctattggattaatttatcgtttgatcaaagcgaagaga
tttaaccgaattctttttttggtcgatcgagaggcgcttggtgaacaggcagaagctgct
tttcgtgacagtaagcttgagagcgcgcattcatttacggaaatctacgaattgaaagcc
ctgaaggacaaaaatccaaatcctgagacaaaagttcatattgcgacagttcagggaatg
ttaaaacgtctcttttacagtcagtcaagtgatgacaaaccgggtgtagcgcagtatgat
tgtatcattgtcgatgaagctcaccggggctatacgctcgataaagagatgagtgagctt
gaaatcgagattcgtgaccatgcagattatgtgagcaaataccggcaggtacttgaatat
ttcgatgctgcgaagattggactgactgcaacgcctgcgctgcatacaacagagattttt
ggtcctcccgtgtatacgtacacatattcggaagctgttattgaaggctatctgattgat
catgagccaccttatcaatttgatacgttactcaagcacaatggaatcacctttgacaaa
ggagcagaagttgaagtctatgattctgtatctggtactttatcgcaagagtacttggaa
gatgaattgaggatcgatataaccggatttaacaaacgtgtgcttaccgacagtttcaat
gaagtggtagtacaagaattggcaaactatattgcacccgatgatgatgggaaaacgtta
atcttcgcagtaaccgatgatcatgctgataaattggtaaatatgttgaaacatgagtat
gatcaacgttatggtagtgtcgaagatagtgcgattatgaaaattacaggctctattgac
gatccgcttggtgccatcagacgttttaaaaacgaacattatcccaacatagtggttact
gttgacttgctcacaacaggtattgacgtgcctaaaattacaaacctggtatttatgcgt
agagtaaaatcccgaattttgtatgaacaaatgcttggacgcgctactcgtagatgtgac
gagataggcaaggatcatttcaaaatatttgatgcggtaggtctttatgagtccttgaaa
gactatacagcaatgaagccggttgtcgtgaatccgaaaattccaattacacagttggtt
gatgaactagggcatattccggagggaaatgatctcaaacggtataaagagcaaatattg
gcgaaagtgcaacgtaaaaaacatcgttttactgctagtcgtgaagaaaatttcaaaatg
cttgctgacggtcgttccatagatgcatttatctcttgggtagagcaactagagccaaat
gaattgcaggaaaacttagccccttacgtggctctgttcaaatatctggatgagaatcaa
gatggagtaaataaagcctatcattcgaaccatcaggatgaatttctgggtgtgacccgt
ggatatggtaatgctgacaaacctgaggactacttgcaaggattcggagattatatcaga
gacaatctgaataaaattccagccctgatgattgtgtgtcagcgtccgactgaattgaca
agagaagaactgaacaaattgcgtggtgaactcgggcaagcgggatatacgttacaaaac
ttgcagaccgcctggcgggaagcgaaaaatgaagatattacggctgatattattgcgttc
atacgccagcaagcgcttggtgatccacttgtcagccacgaggaacgtgtgcggaatgcc
atgaaaaaggtctatgagacgaaggtctggccaccgattcagaagaagtggctggaacgg
attgagaaacaattgttacaagaacctgttcttgggcctgatccggaacaagctttcaac
tacgaacctttcacaagtcaggggggatacaagcaattagatcgtatcttcagtggccag
ttgaatgaaattgtgaaagaaatcaacacgaacttatacagctatgtgaagaaggagcaa
gcttaa

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