KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_008850
Entry
PPSQR21_008850    CDS       T03178                                 
Name
(GenBank) restriction modification system DNA specificity domain protein
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppq02048]
    PPSQR21_008850
Enzymes [BR:ppq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PPSQR21_008850
Prokaryotic defense system [BR:ppq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PPSQR21_008850
SSDB
Motif
Pfam: Methylase_S DUF5944
Other DBs
NCBI-ProteinID: AHM64545
LinkDB
Position
977344..978771
AA seq 475 aa
MSKTKEKSIEELLEEALVPEEEQPYEVPENWIWVKLESVHDIITGSTPSKKVPQYYGGSF
PIIKPGDLDQGDSVILASEYLSDEGKAKSRIIPRNSTLVCCIGSIGKAGFTLVDCTTNQQ
INSLVAIKNTVVPKYTYYFSLSESFRQALISRSSSTTISIINKFKMGQIPFPLPPYSEQR
KISKEIDSLFAKIDEAKRLIDQAKESFELRRASILDKAFRGELTREWRESRQCFLAQPLK
DHLSLITNAPYVLPLIWDWVYLEDVCDKITDGTHHSPESFPVGKYKYITAKNIKESGISL
DDITYVPEEVHREIFKRCDVRYKDILYIKDGATTGVATINNLKEEFSLLSSVGVLRTKSS
ILNPEYLVYCLNSPNIKKMMLNLMTGSAIKRLTLTKIKKGIIPLPPIEEQNKIVDILKTL
FKNEEVQANNIPDKELGRIKQSILMKAFRGELGTNNSSEKSSIDLLIQELKEKSN
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaagaccaaggaaaagagtatagaagagttgttggaagaagcgctagtacccgag
gaagaacagccttatgaggtgccggagaattggatttgggtaaaactggaaagtgttcat
gatattataacaggatcaactccctcaaaaaaagttccacaatattatggtggcagtttt
ccaatcattaagccgggagatcttgaccaaggggattctgttattttagcgagtgaatat
ttaagtgacgaaggtaaagctaaaagtagaattataccaaggaattctactttagtttgt
tgtatcggttcaataggaaaggctggatttacccttgttgattgcactacaaatcaacaa
ataaattcgcttgttgcaattaagaatactgttgttccaaaatatacctattatttctcg
cttagtgagtcctttagacaagctctaatttcaagatcatcatctacaactatttctata
attaacaaatttaagatgggccagataccgtttccattaccaccttattctgaacaaaga
aaaatttccaaagaaattgattcactatttgcgaaaattgatgaagccaagcgtcttatt
gatcaagcgaaagagtcttttgaacttcggcgggcgtctattttggataaggcttttcgg
ggagagttgacgagggaatggcgtgaaagtcgtcagtgctttttggcccagcctttaaaa
gatcatctttccctcattacaaatgcaccgtatgttctaccactcatatgggattgggtt
tatttagaagatgtttgtgataaaattactgatggaactcaccacagtcctgaatcattt
ccagttggaaaatataagtatataactgcgaaaaatataaaagagtcaggaattagttta
gacgacataacatatgtgccagaagaagtgcatcgagaaatctttaaaagatgtgacgtt
agatataaagatattttatatattaaagatggggcaacaactggagtagcaactataaac
aatttaaaagaagaattttctttgttatcttctgttggtgtattaagaactaagagcagt
atattaaatcccgaatacttagtgtattgtcttaattcaccaaatataaaaaaaatgatg
cttaatttaatgacaggaagtgcaataaaaagattaactctaacaaaaataaaaaaggga
attatacctttaccaccaatagaagagcaaaataagattgttgacatattgaaaacacta
ttcaaaaatgaagaagtacaagcgaataatattccagataaagaacttgggaggattaaa
caatcaattcttatgaaggcttttagaggtgagcttggaacaaataattctagcgagaag
agttcaattgatctcttaattcaggaactaaaagaaaaatctaactga

DBGET integrated database retrieval system