Paenibacillus polymyxa SQR-21: PPSQR21_010400
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Entry
PPSQR21_010400 CDS
T03178
Name
(GenBank) ABC transporter like protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPSQR21_010400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_010400
Transporters [BR:
ppq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPSQR21_010400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DUF87
ABC_ATPase
MMR_HSR1
AAA_29
FtsK_SpoIIIE
AAA_22
nSTAND1
AAA_30
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AHM64700
LinkDB
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Position
1197977..1199719
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AA seq
580 aa
AA seq
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MGMMFSFLKKYRVPAIAALVMMLLELTVELSQPYLISKIIDEGIRQQDLPVVWLWGGVLV
GSAVIAFMAGISSSFFASHASQGFGYDVREKLYQKVQSFSYPVFKRFATSSLITRLTGDV
TQVQDTVFMSLRFMTRVPLVVIGSIVMALVVHFRLGLLLAVMAPVLFVFVLVMMRRTVTL
FKSVQRRLDDVNGVIQENLTGIRLIRVFVRMRHEIERFAHYGRELMKGTVFALRWTETTM
PFILFTMNAGIIAVLWFGRGQISTGDASVGQVVAVVNYSLRTIGALSALSGIVVVFSRAT
ASTGRIREVLETPNEEGRELETVPTQDTRIEGQVEMDRVSFHYPGSDLAVLKDISFKARP
GERIAIMGATGSGKSSLVQLITRLYEEDAGHVRFDGKDARQMDGSILREAIGYVPQEVLL
FTGSIRDNIAWGLEHASLEQIQEAARMAQIHPMIERLPQGYDTMLGQRGVNLSGGQKQRL
SIARALVRQPAVLILDDSTSALDVGTETALLNALDGLSCTTFLITQKISSTASADQILLL
DEGRLIASGNHDHLMDSSELYRRIYESQYGKEESHAQGTH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtggggatgatgttctcttttctaaaaaaatatcgggttccagctatcgcggcgctcgtg
atgatgttgctggaattgacggtagagttatcgcagccgtatttgatctccaaaatcata
gatgagggcattcgacagcaggatttgcccgtcgtctggttatggggcggtgtactggtg
ggcagtgccgttatcgcttttatggcagggatatccagttccttttttgcttcacatgca
agtcagggttttggctatgatgtgcgggaaaagctatatcaaaaggtgcaatccttttct
tatccggtgttcaaacggtttgctacttcgtcgctgattactcgcctgacgggagatgtc
acgcaagtacaagatacagtgtttatgagcctgcgatttatgacacgagttccgctggtg
gtgatcggcagtattgtgatggctttggttgtccattttaggcttgggctgctactggcg
gttatggccccagtgctgttcgtatttgtgctggtaatgatgcggaggactgtcactttg
tttaaaagtgtccagcgacgcttggatgacgttaatggagtaattcaggagaatctgaca
ggcattcggctaatccgggtttttgtgcggatgcggcatgaaattgaacgttttgctcat
tatggaagggaattgatgaaagggacggtgttcgctctacgctggacagaaacgacgatg
ccgttcattttgtttacgatgaatgcagggattattgcagtactttggtttgggcgcggc
caaatttccactggagatgccagtgtaggacaggtggttgcagtcgtcaattattccctg
cggacgattggagctttgtctgccttatctggtatcgttgtggtattttcccgggctact
gcatctacagggcggattcgagaggttttggaaacacctaatgaagaaggacgcgagctg
gagactgttcccacacaggacacacgaattgagggacaagtggaaatggatcgggtgagc
tttcattatccgggcagtgatttggctgtgttaaaggatatatcctttaaggcacgaccg
ggtgagcggatcgctattatgggagctactggttcgggcaaatcctcacttgtacagttg
attacacgtctgtatgaagaagatgcaggtcatgtacgctttgacggaaaggacgctcgt
caaatggatggctccatactacgtgaggcgattggctatgtcccccaagaggtgctgcta
ttcaccggttcgattcgggataatattgcctgggggctggagcatgccagtctggagcag
attcaggaagccgcgcgcatggcacaaatccatcctatgattgaacgcttgccgcaaggc
tatgacaccatgctcggacagcgtggtgttaatctgtccggcggacagaagcagcggctg
tcaattgcccgcgcactggtgcgccagccggcagtgctgattctggacgacagcacaagt
gcgctggatgtgggaacggaaaccgcattgctgaatgcactcgatggcctgtcctgtacg
acatttctcatcacgcagaagattagttcaactgcatcagcagatcagattttactgctg
gatgaagggcgcctgatcgcaagtggaaaccatgatcatctcatggatagctcagaactg
tatcgacgtatctatgaatcacaatacggaaaggaggagtcgcatgctcaaggaactcat
tga
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