Paenibacillus polymyxa SQR-21: PPSQR21_010600
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Entry
PPSQR21_010600 CDS
T03178
Symbol
mug
Name
(GenBank) uracil-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PPSQR21_010600 (mug)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppq03400
]
PPSQR21_010600 (mug)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
PPSQR21_010600 (mug)
DNA repair and recombination proteins [BR:
ppq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PPSQR21_010600 (mug)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHM64720
LinkDB
All DBs
Position
1226154..1226690
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AA seq
178 aa
AA seq
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MTEPETELHEVDDHLDYGLSVVFIGFNPSLKSGEVGHHYANPRNRFWRILEGAGLTPRLY
DPSEDRELLKLGFGFTNIVSRPTRGVEDITREEYAEGRLKLHAKLMEYRPKVACFVGKGV
YTEYSKKSKADWGFQPEPLIPEMHEFVAPSSSGLVRMSLEEITNIYSRLQTFLSSEAV
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccagagacagaactacacgaggtagatgatcatctcgactatggattatcc
gttgtatttatcggctttaatcccagtctgaaatccggcgaggtaggacatcattacgct
aatccgcgcaaccgcttttggcgcatactggagggggctggcttgacccctcgcttatac
gatccatcggaagatcgggagctgctaaagctgggtttcggttttaccaacattgtctcc
cgtcctaccaggggagtggaggacattacccgtgaggaatacgccgaagggcgtctgaag
ctgcatgcgaagctaatggaataccgccccaaggtcgcttgctttgtcggcaaaggcgtg
tacaccgaatatagtaaaaaatccaaagcggattggggatttcagcctgaaccactaatc
cccgaaatgcatgaatttgtggcaccttcgtctagtggactggtgcgcatgtcgctggaa
gaaatcacgaatatttatagccgtctccaaacgttcctttcgtcagaagccgtctaa
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