Paenibacillus polymyxa SQR-21: PPSQR21_012500
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Entry
PPSQR21_012500 CDS
T03178
Symbol
groL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPSQR21_012500 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppq03019
]
PPSQR21_012500 (groL)
03110 Chaperones and folding catalysts [BR:
ppq03110
]
PPSQR21_012500 (groL)
03029 Mitochondrial biogenesis [BR:
ppq03029
]
PPSQR21_012500 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppq04147
]
PPSQR21_012500 (groL)
Enzymes [BR:
ppq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PPSQR21_012500 (groL)
Messenger RNA biogenesis [BR:
ppq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PPSQR21_012500 (groL)
Chaperones and folding catalysts [BR:
ppq03110
]
Heat shock proteins
HSP60 / Chaperonin
PPSQR21_012500 (groL)
Mitochondrial biogenesis [BR:
ppq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PPSQR21_012500 (groL)
Exosome [BR:
ppq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PPSQR21_012500 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PPSQR21_012500 (groL)
Exosomal proteins of breast cancer cells
PPSQR21_012500 (groL)
Exosomal proteins of colorectal cancer cells
PPSQR21_012500 (groL)
Exosomal proteins of bladder cancer cells
PPSQR21_012500 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHM64910
LinkDB
All DBs
Position
1463411..1465039
Genome browser
AA seq
542 aa
AA seq
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MAKDIKFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALITEGLKNVTAGASPIGIRKGID
KAVKAAVAELQAISKPIESKQSIAQVAGISAADDEVGELIAEAMEKVGKDGVITVEESRG
FATELEVVEGMQFDRGYISPYMITDTDKMEAVLDNPYILITDKKITNTQEILPLLEKIVQ
QGKPLVLIAEDIEGEALAMLVVNKLRGTFNAVAVKAPGFGDRRKAMLQDIAALTGGQVIT
EELGLDLKTASVDQLGTARQVRITKENTIVVDGAGNKADIDARVSQIRTQLEETTSEFDK
EKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGIVSGGGVALLNV
YNAVAAVELQGDEQTGVNIVLRALEAPIRTIAANAGEEGSVIVERLKREEVGVGFNAATG
EWVNMIDAGIVDPAKVTRYALQNAASVAAMFLTTEAVIADKPEPEKAAMPDMGGMGGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagacattaaattcagtgaagacgctcgccgctccatgctgcgcggggtagat
gcattggctaacgctgttaaagtaacactcggaccgaaaggccgtaacgttgtactggag
aaaaaattcggtagcccgctcatcactaatgacggtgtaacgattgcaaaagaaatcgag
ctggaagacgcgttcgaaaacatgggcgctcaactggttaaagaagtagcaaccaaaaca
aacgatgtagctggtgacggtacgactacggctactgttttggctcaagccctcatcact
gaaggtttgaaaaacgtaactgctggcgcaagcccaatcggtatccgtaaagggatcgac
aaagcggttaaagcagcagttgctgaactgcaagctatctccaaaccaatcgaaagcaaa
caatccattgctcaagtagctggtatttccgctgctgatgatgaagtaggcgaactgatc
gctgaagctatggaaaaagtgggcaaagacggtgtcatcactgttgaagaatcccgcggt
tttgcaacagaactggaagtagttgaaggtatgcagtttgaccgtggctacatttctccg
tacatgattacagatacggacaaaatggaagctgtactggacaatccatatatcttgatt
actgacaagaaaatcacaaacacacaagaaatcctgccattgcttgaaaaaatcgtacaa
caaggcaagccactcgttctgatcgctgaagacatcgaaggcgaagcgctggctatgctc
gttgtcaacaagctgcgtggtacattcaatgctgtagctgttaaagctcctggctttggt
gaccgtcgtaaagcaatgctgcaagatatcgctgccctgacaggcggccaagtaattaca
gaagaactgggtctggacctgaaaacagcttctgtggaccaactgggtacagcacgtcaa
gtgcgtattacaaaggaaaacacgattgtggttgacggtgctggaaacaaagccgacatc
gacgctcgtgttagccaaatccgtacgcaattggaagaaactacttccgagttcgacaaa
gagaaactgcaagagcgtctggctaaattgtccggcggcgtagcagtaatcaaagtcggt
gcggctactgaaacagaattgaaagaacgcaaactgcgcatcgaagatgctctgaacgca
acccgtgctgcggttgaagaaggtatcgtatccggtggtggtgtagcgctcctgaacgta
tacaatgcagttgctgctgttgagctgcaaggcgacgagcaaacaggcgtcaacatcgtg
ttgcgcgctctggaagctccaatccgtacaattgctgctaatgcaggcgaagaaggctct
gttatcgttgagcgtctgaaacgcgaagaagtaggcgttggtttcaacgcagctactggc
gagtgggtaaacatgattgacgcaggtatcgttgaccctgcgaaagtaactcgttatgca
ttgcaaaacgctgcttccgtagcggctatgttcctgactactgaagcagttatcgctgac
aagccagaaccagaaaaggctgcaatgcctgacatgggcggaatgggcggaatgggcggc
atgatgtaa
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