KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_014840
Entry
PPSQR21_014840    CDS       T03178                                 
Name
(GenBank) positive control sigma-like factor
  KO
K24072  positive control factor
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppq03021]
    PPSQR21_014840
Transcription machinery [BR:ppq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PPSQR21_014840
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 GerE HTH_10 Terminase_5 Fe_dep_repress HTH_29 PhyR_sigma-like EAD1 KORA Importin_rep_6
Other DBs
NCBI-ProteinID: AHM65136
LinkDB
Position
1701733..1702275
AA seq 180 aa
MLANEDKPMKQQMEPIDLGAATPLNYRKSLNLAQRAYRKANTGDKKVISGMISDCEFVEE
WLVTGRRPGNKRGVERLAAYQRERPVDPLRMQAYVQRNHAGSPANLSEWQLFQIEDALST
LSPRERECYTMAHGQCFSRSQIAEYLGITKDSVTEYVERAAKKVAQAVQESLFLSPDCHL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcttgcaaatgaggataagcccatgaaacaacaaatggaacctatagatttaggagca
gctacgccccttaattaccgtaagtctcttaatcttgcccaacgagcatatagaaaagcc
aatacaggcgataagaaagttatatcgggtatgatatcagattgcgagtttgtggaggaa
tggctagtaactggaagaagaccaggtaataaaagaggggttgaacggctggctgcttac
caacgggaacgtccagtagatccgttaaggatgcaggcatatgtgcaacgcaatcatgcg
ggcagtccggcgaatttatctgaatggcagttgtttcaaatagaagatgccctatctacg
ctcagtccacgagaaagggaatgttacactatggcccatggacaatgcttctcaaggagc
cagattgctgagtatttgggcattacaaaggacagtgtaacggagtatgtggagagggcc
gcaaaaaaagttgctcaggctgttcaagagagcttgtttttgtcccccgattgccaccta
tag

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