Paenibacillus polymyxa SQR-21: PPSQR21_016300
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Entry
PPSQR21_016300 CDS
T03178
Symbol
csdA
Name
(GenBank) cysteine desulfurase, aminotransferase class-v
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00450
Selenocompound metabolism
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PPSQR21_016300 (csdA)
Enzymes [BR:
ppq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PPSQR21_016300 (csdA)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PPSQR21_016300 (csdA)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Pyridoxal_deC
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
AHM65282
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Position
1851112..1852335
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AA seq
407 aa
AA seq
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MNTALIREQFPILHQEINGHPLVYLDNAATSQKPLAVIEAIKHYYEFDNSNVHRGVHTLG
SRATDAYEGAREKVARFLNAKRSQEIIFTRGTTTALNLVASSYGRANCKEGDEIVITPME
HHSNLIPWQQVAKATGATLKYIPLQEDGSVDLADVEKTVTEHTKIVAIAHVSNVLGVVNP
VKEIAAIAHRKGAVIVVDGAQSTPHMKVDVQDIDADFYAFSGHKMCAPTGIGALYGKKAL
LENMEPVEFGGEMIDDVGLYESTWKELPWKFEGGTPIIAGAVGLGAAIDFLESIGLDAIA
QHESRLTNYALKRLREVEGLTIYGPAERHVGLVTFNLDDVHPHDVATVLDSKGVAIRAGH
HCCQPLMRWLKASATARASFYLYNTEEDIDALVSALIQTKEYFGDAT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcattgatccgtgaacaattcccgattttacatcaggagattaacggtcat
ccgctggtttatttggataatgcggccacttcgcaaaagccgctagcggtcatcgaggcg
atcaagcactattacgagtttgataattcgaatgtacaccgtggtgtgcataccttgggt
agccgtgctacggatgcttatgaaggtgcgagggagaaggtagcccgttttctgaatgcc
aagcgcagtcaggaaatcatttttacacgcgggacaacaaccgcgctgaatctggtggct
tcttcttacggtagagctaactgtaaggagggtgatgaaattgtcattactccgatggaa
catcacagtaatctgattccgtggcaacaggtagccaaagccactggtgcgactttaaaa
tatattccgcttcaagaggacggtagcgttgatcttgcagacgtggagaaaaccgtcaca
gaacacacaaaaattgttgcgattgcgcatgtctccaatgtgcttggcgttgtgaatccg
gtcaaagagattgctgctattgcacatcgcaaaggtgcagttatcgttgtcgacggtgca
caaagtacgccacatatgaaagtagacgtgcaagacatagatgctgatttttatgctttc
tctggtcacaaaatgtgtgctcctacaggaattggtgcactctacggcaagaaggcgttg
ctggaaaacatggagcccgttgagtttggcggtgaaatgatcgacgatgtgggattgtat
gaatccacatggaaggagctaccttggaaattcgaaggtggcaccccgattattgctggg
gcagttggcttgggagctgccattgattttctggaaagcatcggactagacgccattgca
cagcatgagagccgtctaacgaattatgcactcaaacgtctccgtgaagtggagggtttg
acgatctatggacctgctgaacgtcatgtcgggcttgtaacattcaacttggatgatgtg
catccgcatgatgtagctactgtactggatagcaaaggggtggccatacgtgcgggccat
cattgctgccagccattgatgcgctggttgaaagccagtgcaactgcacgtgccagcttt
tacctctataacacggaagaggatatcgacgctctggtcagcgccttaatccaaacgaag
gagtattttggcgatgcaacttga
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