Paenibacillus polymyxa SQR-21: PPSQR21_018070
Help
Entry
PPSQR21_018070 CDS
T03178
Name
(GenBank) ribosomal small subunit pseudouridine synthase a
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppq03009
]
PPSQR21_018070
Enzymes [BR:
ppq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PPSQR21_018070
Ribosome biogenesis [BR:
ppq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PPSQR21_018070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ribosomal_S28e
Motif
Other DBs
NCBI-ProteinID:
AHM65456
LinkDB
All DBs
Position
2023308..2024090
Genome browser
AA seq
260 aa
AA seq
DB search
MSGKGRQTQRLDKILTHMGYGSRSDIKRQVKQGMITVNGRIIKDSGLQVHPYQDQIEVNG
ELVVFREFIYIMLHKPPGVISATEDTRERTVLDLLSAEERHFEPFPVGRLDKDTEGLLLL
TNDGKLAHELLSPRRHVPKTYEATVLGLVTEEDILQFTAGVELDDGYVTLPAQLTILRHE
QPHQADGEVISYISLVIHEGKFHQVKRMFEAVGKKVTYLKRTAMGPLKLDDQLPLGSYRE
LTSEELALIGRDIVSATSEA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaaggaagacaaactcagcgtttagacaaaattttgacccatatgggctat
ggttcccgtagtgatatcaagagacaggtaaagcaaggtatgatcacagtaaacggacgg
atcatcaaggatagcggcttacaggttcatccatatcaagatcaaattgaagtgaacggc
gaacttgttgtttttagagagtttatttacatcatgctgcacaagcccccaggtgttata
tctgcaaccgaagatacgagggaacgaacggtgctggatttgctgagtgcggaggaacga
catttcgagccttttccagtagggcggctagataaagatacagaaggcctattgttattg
accaacgatggcaagctggcgcacgaactactatctccgaggcgtcatgtccccaaaacg
tatgaagctacggtgttgggacttgtcacggaggaggatatccttcaatttacagcagga
gtggaactggacgatgggtatgtcacccttcccgcgcagttgacgattcttcggcatgaa
cagccgcatcaggcagatggggaagtcatttcctatatttcgcttgtaatccatgaaggt
aagtttcaccaagtgaagcgcatgttcgaggcggttggtaaaaaagtgacctacttgaaa
agaacagccatggggccattgaagctggatgatcagcttccactgggcagctatcgagag
ctgactagcgaagaactggcattgatcggccgtgatatagtttccgcaacatcagaagct
tga
DBGET
integrated database retrieval system
