Paenibacillus polymyxa SQR-21: PPSQR21_020620
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Entry
PPSQR21_020620 CDS
T03178
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPSQR21_020620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_020620
Transporters [BR:
ppq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PPSQR21_020620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
NB-ARC
AAA_22
AAA_29
DUF87
AAA_16
RsgA_GTPase
Dynamin_N
MMR_HSR1
MobB
AAA_18
FtsK_SpoIIIE
T2SSE
cobW
NACHT
AAA_33
AAA_30
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AHM65710
LinkDB
All DBs
Position
complement(2287741..2289498)
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AA seq
585 aa
AA seq
DB search
MFSVLKNLGWFFKRERSRYAIGLFLLIAVGVLELAPPRLLGSAIDEIVRGSISWSSLWRY
ILYIIGILAVIYYITYIWMHKLFGGANLVERLLRTRFMNHLLRMTPPFFERNRTGDLMAR
ATNDLRSVASTAGFGMLTLTDSTVYLTVVLVAMGTLISWKLTLAAILPLPFIALAMSIYG
KAVHERYTLAQDAFGDMNDQVLESVAGIRVIRAYVQERMDEKRFADITEDVFRKNLAVAR
MDALFEPTIRLCVGLSYVIGLGYGIYLVFHNDITLGELVSFNMYLGMMIWPMFAIGELIN
IMQRGSASLDRVNETLDVQPDVQDVAQPVPVDHPESITMKDVTFRYPTSTVDNLSHVNLE
LKRGETLGVVGRTGSGKSTLLKQLLHEYPTGSGDILISGTRLEDIAAEQLHSWIGYVPQE
QILFSKSVRENIQFGKPGADDDYIMEAIRTAAFDQDLGTLSDGLDTLVGEKGIALSGGQK
QRVSLARAFIGDPDILVLDDALSAVDARTEARIIDNIRHKRSGKTTLISTHRLSAVEHAD
RIVVLEQGRIIEEGTHNELLQADGWYRQQYERQQVESDLTSGEVS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgttctcagtactcaaaaatttaggctggttttttaaaagagaacgaagccgatacgcc
attggattgtttttgctgattgcggttggcgttttggagcttgctccacctcggctgcta
ggcagcgccattgatgagattgtacgcggttcgatttcctggtcctcgctttggcgttat
attttgtacatcataggcattcttgccgtcatctactacattacgtacatatggatgcac
aagctgtttggtggtgctaatctggtggagcgcctattgcgcacacgttttatgaatcat
ctgctgcggatgacccctccattttttgaacgcaatcgtacaggcgatctgatggctcgt
gccacgaatgatcttcggtctgtcgcaagtacagcaggcttcggtatgttgacattaacg
gactccactgtctaccttaccgttgtattggttgccatgggcaccctgattagctggaag
ctaacactggcggccattctgccccttccttttattgcgctggccatgagtatttacggt
aaagccgtacatgagcgttacacactggcacaagatgcatttggcgatatgaacgatcag
gtgctggagtcggtggctggtatccgtgtcattcgggcttatgtgcaagaacgaatggac
gaaaaacgttttgccgatattactgaggatgtgtttcgtaaaaacttggcagtggcccga
atggatgctctctttgaaccaacaatccgtttatgtgtaggacttagttacgttatcgga
ctcgggtatggtatttatctggtatttcataacgatatcacgctaggcgaactggtatcc
tttaacatgtatctaggaatgatgatttggccgatgtttgccattggcgaactgattaac
attatgcagcgcggtagcgcttccctggaccgggtcaatgaaactctcgatgtccagcca
gacgttcaggatgtagcccaacctgttccagtggatcatcccgaatccatcactatgaaa
gacgtgacttttcgttatcctacctccacggttgacaatctgtcacatgtgaatctggag
ctcaaacgtggagaaacactaggtgtcgtcggtcgaacaggcagtggaaaatccactttg
ctcaaacagctattgcatgaatatccgactggcagtggtgatattttaatctccggcact
cggctggaggacattgcagcggaacaattacacagctggattggctacgtgccgcaagaa
caaattttgttctccaaatcggtgcgcgagaacattcagttcggaaagcctggggccgat
gatgattacatcatggaagcgattcgtacggccgcctttgatcaggatctgggaactctg
tccgatggactggatacattggtcggagaaaaaggcatcgccctgtccggcggtcagaag
cagcgtgtttcgcttgcgcgcgcctttattggtgatccggatattctagtactcgacgat
gcactatcagcagtagatgcccgcacggaagcacgtattattgacaatatccgtcataaa
cgctcgggtaaaacaaccttgatctccacccaccgtctatcggctgtagagcatgcagat
cggatcgtcgtgctggagcaaggacgtattattgaggaaggaacccacaatgagctgctt
caagctgacggatggtaccgacaacaatatgaacggcaacaagtggaatctgatctgacc
tcaggggaggtatcctaa
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