Paenibacillus polymyxa SQR-21: PPSQR21_024740
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Entry
PPSQR21_024740 CDS
T03178
Name
(GenBank) transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppq03000
]
PPSQR21_024740
Transcription factors [BR:
ppq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PPSQR21_024740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_Tnp_ISL3
HTH_Crp_2
HTH_31
HTH_IclR
HTH_38
Sigma54_DBD
DUF6879
Motif
Other DBs
NCBI-ProteinID:
AHM66116
LinkDB
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Position
2838442..2839449
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AA seq
335 aa
AA seq
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MERRQVESMKPKLNDVAQLAGVSPTTVSRVLNNRGYISQETKDQVHKAMQELNYFPNDVA
RSLFTKRTNLIGLIIPTTSNPFFGELTFHIENICASLGYKLLLCNSLNQLDKEESYVDML
MRNQVDGIIVGTHNRGIVNYEQKNIAVIAIDRFLSDSIPVVGSDNYMGGKLASELLIEKG
CKHILHINGPVELETPASLRRKAYEDVMEQYSREAITYEVHDPFHQQNHDEPIKRLLDEH
PEVDGLFASNDMVAASFIAEARRRGKRVPEDIRVIGYDGTETTRNLLPELTTIQQPIQEI
ARSSIELLIKEIEGGYSDVPRETYLPVKLIKASTA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaggcaggttgaatcaatgaaaccaaaacttaacgatgttgcacaattagct
ggagtttcaccgactacggtttctcgcgtacttaataatcgtggctatatcagtcaagaa
acgaaggatcaagttcataaagcgatgcaggagctaaattattttcctaatgatgtagct
cggtcattatttactaaacggacaaatctgattggattaatcattccaactacgagcaac
ccatttttcggagagctgactttccatatagagaatatttgtgcgtcattaggctataag
ctgttgctatgtaacagcttaaatcagctggataaagaagagtcttatgtagatatgctt
atgcgaaatcaagttgacggtattatcgtcggtacacacaaccgaggtatcgtaaattat
gaacagaagaatattgcagtcattgcgatcgaccgtttcctatccgattcaatcccagtt
gtaggatcggataattatatgggtggaaaactggcatcagagctgcttattgaaaagggg
tgcaagcatatcttacacataaatggccctgttgaattggaaacaccagcaagtttaaga
agaaaagcatatgaagatgtgatggagcagtatagtcgagaggcaattacctatgaagta
catgatccctttcaccaacagaatcacgatgaaccgattaaacgcttgctcgatgaacat
cctgaagtagatggattgttcgcgagtaatgacatggtggctgcgtcttttattgctgaa
gcaagaagaagaggaaaacgggttcctgaagatatccgcgtaattgggtatgacggaaca
gaaacaacccgcaatcttctccctgaattaacgacaattcagcaaccaatacaggagatc
gcgagatcttccatagagttacttattaaagaaattgaaggtggatacagtgatgtcccg
cgagaaacctatctaccagtgaaacttattaaagctagtacagcttaa
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