Paenibacillus polymyxa SQR-21: PPSQR21_024770
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Entry
PPSQR21_024770 CDS
T03178
Name
(GenBank) catabolite control protein a (glucose-resistance amylase regulator)
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppq03000
]
PPSQR21_024770
Transcription factors [BR:
ppq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PPSQR21_024770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
HTH_Crp_2
SpoIIID
HTH_26
Sigma54_DBD
HTH_7
MerR
HTH_24
HTH_AraC
HTH_31
HTH_38
HTH_23
HTH_17
Sigma70_r4
TnsD
Motif
Other DBs
NCBI-ProteinID:
AHM66119
LinkDB
All DBs
Position
complement(2842689..2843702)
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AA seq
337 aa
AA seq
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MKMTIKDVARMANVSISTVSRVINNSQTVNSEIRKRVLDVLEATQFRPNAIARTLVKNNT
SLIGVLLPAIKNNVFDDMVEGINQVAHLYGFDVIIALSGGDADSELHYYNMFREMQASGI
IISVSGIRDALFALIEAAGIPCILVGRDFRDQTIPSVHVDNITAAFEAVTYLIQQGHQDI
AMLQGPAGDISVSNQRFLGYEQALKTAHLPVRPERVLESGFSVEDGITSMRKLYHSGPLP
SAVFCATDRVAIGAMNFLAENGVKIPEQVSFFGFDDIDMATIIRPKLSTVRYSASELGMV
AARNLIKLIRGEELAAVHWSISHQLEIRDSSTKLGVS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgactataaaagatgtggctcgaatggccaacgtctccatttctacagtttcc
agagtgatcaataatagccagacggtcaacagtgaaatacgcaaacgagttctggatgtt
cttgaagccactcaattccgtccaaatgccatagcacggacattggtaaagaataataca
tctttgattggggtacttctgcccgcgattaaaaacaacgtttttgatgacatggttgaa
ggcatcaatcaagtagcgcatctatacggcttcgatgtcataatcgccttgtcaggggga
gacgcggactctgaattacactattacaatatgttccgtgaaatgcaggcgagcggaatt
attatatcggtaagcggaatccgggatgcgctattcgcgctcattgaagcggcgggaatt
ccctgcatccttgtcggacgggatttccgagaccaaaccattccttccgtgcatgttgac
aacataacggctgcttttgaagcggtaacttatctaatacagcagggtcatcaggatatc
gcgatgctgcagggaccagcgggggatatttcagtgagcaatcagcgttttttgggctat
gaacaggcattgaagaccgctcacctgccagtacgccccgaacgtgtgttggaaagcggc
ttttcagttgaagatggcataacctctatgagaaaactttatcattcaggcccactgcct
agtgcggtgttctgcgcaacggaccgagttgccataggcgctatgaactttctggccgaa
aatggggtgaaaatacctgaacaggtctctttcttcggatttgacgacattgacatggct
acaataatccggcctaaattgtcaactgtccgatattcagcatccgaacttggcatggtc
gccgcccgcaatctcattaagcttattagaggagaagaattggcggctgtccactggtcc
atatctcatcagttagaaattcgggacagcagtacaaaacttggagtatcctaa
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