Paenibacillus polymyxa SQR-21: PPSQR21_027230
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Entry
PPSQR21_027230 CDS
T03178
Symbol
elaC
Name
(GenBank) ribonuclease z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_027230 (elaC)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PPSQR21_027230 (elaC)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PPSQR21_027230 (elaC)
Prokaryotic type
PPSQR21_027230 (elaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Aspzincin_M35
Motif
Other DBs
NCBI-ProteinID:
AHM66365
LinkDB
All DBs
Position
complement(3148124..3149056)
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AA seq
310 aa
AA seq
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MELYFLGTNAGVPTIQRNVTSIALRLLEERRSMWLFDCGEGTQQEVLRSPLKLSRLEKIF
ITHLHGDHLFGLPGLLSSRAYQGGTAPLTVYGPPGLQQYIELSLGISQSRINYPLHIVEH
TGGVLFDDGQFRVESALLDHRIDSYGYRIVEMDKPGKLNQELLERYGIKPGPVYGKLKRG
ESVEVEGGVILHPQDVLGSPKKGRIVTILGDTRPCPNTVVLARDATVVVHEATFLHDLAD
TAYEYHHSTALQAAEAAKAAGAGQLIMTHFSSRYKDQEQLQPLLEEARSLFPNSLLAEQH
VLLPVPDIGQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggaattatattttctcggtacaaatgcaggggtacctacaattcagcgaaatgtaacg
tccattgctcttcgtttactggaggaacgaagaagcatgtggttgtttgactgcggtgaa
ggcactcaacaggaagtgttgcgttcgccgctcaagctgagcagacttgaaaaaatattt
atcactcatttgcatggggatcatctttttggtctgccgggtcttttgtcgagcagggca
tatcagggaggtacggcacctctgacggtatatggaccgcctggtcttcagcaatatatt
gagctatctttagggatcagccaatctcgtatcaattacccactacatattgtggagcat
acgggcggggttctgttcgatgacggtcaatttcgggtggagtcagctttgttggatcat
cggatcgacagttatggctaccgaattgtagagatggataagcccggtaagcttaaccaa
gaactgttggagcgatacgggatcaagcctggcccagtgtacggtaaattaaagcgtgga
gaaagtgtggaagtagagggtggagttattctgcatcctcaggatgtattgggttcacct
aaaaaagggcggatcgtcactattttaggtgacacgagaccttgcccgaatacagtagtg
ctggcacgagatgcaactgtcgtcgttcatgaagccacatttctgcatgatctggcggat
acggcgtacgagtatcatcatagtacggcacttcaggcagcggaagctgccaaagccgca
ggcgcgggacagttaattatgacgcattttagttctaggtataaagatcaagagcagctt
cagcctttgctggaggaagcgcgaagcctattccccaattcattgcttgcggagcagcat
gtgttgttaccggtacctgatatcggtcaataa
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