Paenibacillus polymyxa SQR-21: PPSQR21_027820
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Entry
PPSQR21_027820 CDS
T03178
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PPSQR21_027820 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppq03400
]
PPSQR21_027820 (mutS)
DNA repair and recombination proteins [BR:
ppq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PPSQR21_027820 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Rad17
AAA_27
ATPase_2
ACBP4_C
Motif
Other DBs
NCBI-ProteinID:
AHM66424
LinkDB
All DBs
Position
complement(3203896..3206736)
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AA seq
946 aa
AA seq
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MWGLGNGMSKYTPMIEQYLSIKEQAKDAFLFFRLGDFYEMFFDDAILASKELEITLTGRE
GGVAEKIPMCGVPYHSAENYIQRLIEKGYKVAICEQMEEASATKGMVRRDIVRVVTPGTV
MEGKVLGDKSNNYMVCVTETDGMLALAACDLSTGELYVTSVPDSKEWLLDEINIYEPSEM
LGDGHLLDFVTSRMSPVGRRVVYTAWDKSKDDLVRDQFGEATWARLTEERRRCVSRLIAY
LNETQKRSLGQLTQISVYEPNHFMILDPFTRRNLELVETVRERSKKGSLLWLLDRTETSM
GARLLRRWIDKPLLSSNLIEERLEAVDKLYHQFIFREDVRAQLKEIYDLERLVGRIAFGS
ANARDLIALKLSLAQIPSLRELCAESPSNTLRRIAQTLDSCTDLCTLIEEAVADEPPISV
RDGGLIKEGYHQRLDELREASVNGKRWIAELEAKERVATGIRSLKIGYNKVFGYYIEVTK
SNLASLPEGRYERKQTLANAERYITPELKEKESLILEAEDKMVDLEYTLFSELRGKLNAE
IPRLQKLAEQVAEIDVYQSLATVSAERGFVKPELTTGYDFVVEQGRHPVVEAVMKDGGFI
ANNTVLEEADAHILLITGPNMAGKSTYMRQVALIAIMAQIGCFVPAARAKVPMLDRIFTR
IGAADDLIGGQSTFMVEMADIQVMTDKATPRSLIIIDELGRGTSTSEGMAIAQAVIEFVH
DTIGCKALVSTHFHELAHLEQGLSSLRNYSMAVQESGDKVNFLRKLIPGAASSSYGIYCA
RLAGLPNNIIERANGLLYGFEQAAAQVTAGTEAVGGAKEGTDLRTASGTEEISPMSAKYV
GQTLSANGDTAPQVQSGSQQATLVKEDALQIVEDSGELERSASDVVQLSIFGEQDLAPSK
PHSETVEANPIVRQILRKVKNADVMNMTPLQAMQLLNELKNKANGL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggggttaggtaacggtatgtctaaatatacaccgatgatcgagcaatatttatct
ataaaagagcaggctaaagatgcatttttgtttttccgcctaggggatttttacgagatg
ttttttgatgatgcgattcttgcatccaaggagctggaaattacactgactggtcgtgag
ggtggcgtcgcggagaaaattccaatgtgcggcgtgccttatcattcagcagaaaattac
atacaacgccttattgagaagggttataaggtggccatctgtgagcaaatggaggaagcc
tcagctacgaagggaatggtgcggcgggatatcgtccgtgtggtgaccccgggtacggtc
atggagggcaaagtgctgggtgataaatccaacaactacatggtatgtgtcacagagacg
gacgggatgctggcgctggcggcatgcgacttgtcgacaggtgaactctatgtgacttcc
gtacctgattcgaaagaatggctattagatgaaattaacatttatgagccgtccgaaatg
ttgggggatggtcatttgctcgattttgtgacctctcgtatgtcccctgttggacggcgt
gttgtgtatacggcctgggacaaatccaaagatgatctggtacgggatcaattcggtgaa
gccacatgggcaaggcttacggaggaacgcagacgttgcgtatcgcgcctgattgcctac
ttaaatgaaacgcaaaaaagatcgttaggtcaactgacccaaatctcggtctatgagccc
aatcattttatgattctggatccatttacccgccggaatctggaactggtggagacggtg
cgtgaacgctccaagaaaggctcgctgctgtggctgttggatcggacagagacatccatg
ggcgcacgtttgttgcgtcgttggatcgacaaaccgctgttgagcagcaatttaattgag
gaacgattagaagcggtagacaagctgtaccaccagtttattttccgcgaggatgtacgt
gctcagcttaaagagatttacgacctggagcgtttggtaggacggatcgcttttggtagt
gctaatgcacgagatttgatcgctctcaagctgtctctggctcaaattccgtctttacgc
gagctgtgcgctgagtctccatcgaatacgctgagacggattgcacaaacattggacagc
tgtacagacctgtgtacgctaattgaggaagcagttgccgatgaacccccgatttccgta
agagatggagggcttataaaggaaggttaccatcagcgtctggacgaactgcgtgaagcg
agtgtgaacggtaagcgttggatcgctgagctggaagccaaggaacgtgtagcaaccggc
attcggtcgctcaaaatcggatacaacaaagtgtttggttattacatcgaggtgaccaaa
tccaatttggcttcattaccggaaggtcgatatgaacgcaaacagacgttggcgaatgca
gaacggtatatcacaccggaattgaaggaaaaggaatcgctgattctggaagctgaggat
aaaatggtggatttggagtacacgcttttctccgagcttcgcggtaaactgaacgctgaa
attccccgtttgcaaaagctggcagagcaagttgctgaaatcgacgtgtatcagtcgctg
gcaacggttagcgcggaacgtggattcgtgaaacctgagctgacaacaggatatgatttt
gtagtggaacagggacggcacccggttgtggaggccgtaatgaaagatggtggctttatc
gccaacaacacagtgttggaagaagccgatgcgcatattctactcatcaccggtccgaat
atggctgggaaaagtacgtatatgcgtcaggttgccctcattgcgattatggctcaaatt
ggctgctttgtcccggctgcacgtgctaaagtgccgatgctggatcgcattttcacacgg
atcggtgctgcggatgatctcatcggcgggcagagtacgtttatggtcgaaatggcggat
attcaagtcatgacggacaaggcaactccgcgaagcttgattattattgatgaactggga
cgaggaacgtccaccagcgaagggatggcaattgcacaagcggtcatcgaatttgtgcat
gatacgattggttgtaaggcgctggtatctacgcatttccatgagctggcccatttggag
caaggtctgtcttcgctgcgaaattactccatggctgtgcaggaaagcggcgataaggtg
aatttcctgcgcaagctcataccaggcgcggctagcagtagctatggtatttattgtgcc
cggcttgcaggtttgcctaataacattattgagcgagcgaatggtctgctgtatggtttt
gaacaggcggcagctcaagtaacggcgggcaccgaggctgtaggaggagcgaaggaaggg
actgatcttcgtacagcgtcagggacagaagagatttctccaatgtccgcaaaatatgta
ggccagacattgtcagcgaacggagatacagcaccacaagtccagtctggatcacagcaa
gccaccctggtaaaagaagatgctttacagattgtggaagattcaggtgagttggagaga
tcagcttctgacgtggtacagctgtccattttcggagagcaggatcttgctccctccaag
ccacactcagagacggtagaagctaatccgatcgtgcgccaaattttgcggaaggtgaag
aatgctgatgtcatgaacatgacacccttacaggcgatgcaattgttaaatgaattaaaa
aataaggccaatggtctgtaa
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