KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_028110
Entry
PPSQR21_028110    CDS       T03178                                 
Name
(GenBank) DNA topoisomerase iv, a subunit
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppq03032]
    PPSQR21_028110
   03036 Chromosome and associated proteins [BR:ppq03036]
    PPSQR21_028110
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppq02048]
    PPSQR21_028110
Enzymes [BR:ppq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PPSQR21_028110
DNA replication proteins [BR:ppq03032]
 Prokaryotic type
  DNA Topoisomerases
   PPSQR21_028110
Chromosome and associated proteins [BR:ppq03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PPSQR21_028110
Prokaryotic defense system [BR:ppq02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PPSQR21_028110
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Nnf1 Beta-prop_ELP1_1st
Other DBs
NCBI-ProteinID: AHM66453
LinkDB
Position
complement(3235358..3237820)
AA seq 820 aa
MSLSEQFLPAYLEEMVGDRFGRYSKYIIQDRAIPDVRDGLKPVQRRILYAMYDSGNTPEK
AYRKSAKTVGDVMGNYHPHGDSSIYDGMVRMAQPWKMSHVLVDGHGNWGSQDDDPAAAMR
YTEARLSPIAMEMLRDIEKRTVLFKDNFDNSAKEPVVLPSRYPNLLVNGSSGISAGFATE
IPTHSLREVIDATIAVMEKPQIELEEIMTFIKGPDFPTGGLIMGGEGIKDAYRTGKGRIY
IRSKTEIQSLRGGKQQLVITEIPYQVVKSRLVTAMENIRLEKKVEGIAEVRDESGRNGLR
IVVELKKEADAEGILAYLLKKTDLQVAYNFNMVAIVNKAPHQLGLKSILEAYIAHQREVV
TNRIKFELEKAEDRAHVLEGLVKALNILDEVIAAIKASKNRQDAQNNLQWMFGFSERQAD
SILTLQLYRLTNLEITTLEKELADIQKKITQYRSILESDRKLISLIRKELLEIREKYGID
RRSEIQGEVEEIKVNLEVMVAAEDVLLTLSKDGYVKRTSMLSFTRSGGDRSNSGVKEGDY
ITQFLDVNTLDVLLVFTQRGQYFLLPVHQIPEYKWKEPGTPIVNVISLSKEDRIVSVIPI
KNIEEIGKSLVFVTKKGQVKRTELTEYATKRSSAVAACKVAGDDEILSVTLSDNSKDIML
ITRAGMSIRFKEQEVNAMGRVSAGVKGIQLAEGDEIVAALWVEEDEGEVLVLTESGYGKR
TLLLDYPSQGRGGKGISTFEFKEGKRVRSNGTRIVAAFYCREAVQLFVITSEGQTMSFLS
EKAPLTDRKDTGKLLAPVEKKDEIVNVLPRSEPQSSQTVE
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgagcttatcggagcaatttttgccagcttatctggaggaaatggtcggtgaccgcttt
ggccgatattccaaatatataattcaggatcgggcgatccctgatgtacgggatggatta
aagcccgtacaacgccggattctgtacgcgatgtacgattcgggtaataccccggaaaaa
gcgtatcgcaaatccgccaaaaccgttggggacgttatgggtaattaccatcctcacggt
gattcatctatttacgatgggatggtacggatggcgcagccttggaaaatgagccacgta
ctggtggatggccacggcaactggggttctcaggacgacgatcctgcggcagctatgcgt
tacacggaggcacgtttgtctccgattgcaatggaaatgctacgtgatatcgaaaaacgt
acggttttgttcaaggataactttgataactcggcaaaggaacccgtcgtgctgccctcc
cgttatcctaatctgttggtaaacggatctagcgggatttcagcggggtttgcaacggaa
attccaactcatagcttgcgtgaggtgattgacgccaccatcgcagtgatggaaaagccg
cagatcgaactggaagagattatgacctttataaaaggcccagattttccgactggcgga
ctcattatgggtggcgaaggtatcaaggatgcatacagaacaggcaaaggacgcatttat
atccgttccaaaacggaaattcagtctttgcgtggaggcaagcagcaactggttattaca
gagattccataccaggttgttaaatccaggctcgtaaccgctatggagaacatccgtctg
gagaaaaaggtagaagggattgccgaagttcgtgacgagagtggacgaaatggcctgcgt
attgttgtcgagctgaagaaggaagcggatgcggaaggtattttggcatatctgctgaaa
aaaaccgatctccaagtggcttataacttcaatatggtagctatcgtaaacaaagcgccg
caccagcttggactaaaatccattttagaagcgtatattgctcaccagcgtgaagttgtc
acaaatcgcattaagtttgagctggaaaaggcggaggaccgcgcacatgtactggaaggt
ttggtcaaggcgctgaacattctggatgaagtcattgcggctattaaagcttccaaaaat
cgtcaggatgcacaaaataatttgcaatggatgtttggctttagtgaacggcaggcggat
tccattttgactctgcaattgtaccgtcttacgaatcttgaaattaccaccctcgaaaaa
gaacttgctgacattcagaagaaaattactcaataccgttctattctggaaagtgaccgc
aagctgatcagtctgatccgcaaagagttgctggaaattcgtgaaaagtacggcattgac
cgtcgttcggaaatacagggtgaagtagaagagattaaggtaaatctggaggtcatggtt
gcggcagaggatgtattgctaactctctcgaaagatggctatgtgaaacgtacgagtatg
ctgtcgttcactcgttctggcggggatcgttcaaattccggagttaaagaaggggactac
attactcagttccttgacgtgaatacactcgatgtgctgctcgtcttcacccagcgtgga
caatactttttgctgcctgtgcatcagataccggagtataagtggaaagagccgggcact
ccaatcgtcaatgtcatttcgctatcgaaggaagatcgaatcgtaagtgttattccgatc
aaaaatatagaggaaatcggcaaaagcctggtgtttgtaacaaagaaagggcaagtcaaa
cgaacggaacttacagaatatgccacaaagcgttccagtgctgtagcagcctgcaaggtg
gctggcgacgatgagatattatcagtaacattaagcgacaatagcaaagatattatgttg
attacccgtgcggggatgagcatacgcttcaaggagcaagaggttaatgccatgggccgc
gtttcagcgggggtcaaaggtatacaactggcggaaggcgatgaaattgtcgcagcacta
tgggtagaagaagacgaaggagaggtgctggtactaaccgaatccggttatggtaagcgt
acgcttctgctggattatccttctcagggaagaggcggtaaaggaatcagcaccttcgaa
ttcaaggaaggcaagcgggtgcgttcgaacggaactcgaattgtggctgccttctattgc
cgtgaagctgttcaattatttgtcatcacatcagaaggacagacgatgtccttcctttcg
gaaaaagctcctttaaccgatcgcaaggatacaggcaaactgctggctccggtggagaag
aaggacgaaattgtaaatgtgctgccgcgtagtgagcctcagagttcgcagacagtagaa
taa

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