Paenibacillus polymyxa SQR-21: PPSQR21_029930
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Entry
PPSQR21_029930 CDS
T03178
Name
(GenBank) ribosomal RNA large subunit methyltransferase j
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppq03009
]
PPSQR21_029930
Enzymes [BR:
ppq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
PPSQR21_029930
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
PPSQR21_029930
Ribosome biogenesis [BR:
ppq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PPSQR21_029930
23S rRNA modification factors
PPSQR21_029930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AHM66635
LinkDB
All DBs
Position
complement(3422700..3423551)
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AA seq
283 aa
AA seq
DB search
MSVPKERIDVLLVEQGFFESREKAKAAIMAGLVLADSERIEKAGMKVPRSSELKVKGSVH
PYVSRGGLKLEKAIRQFELDMKGRTMLDIGSSTGGFTDCALQHGAQYVYAIDVGYNQLDW
SLRNDERVCVMEKTNFRYMTPADLSGPVPNFASIDVSFISLRIILPPLLALLHQPADIVA
LIKPQFEAGREKVGKSGVVREPATHKEVLQTILMFAHELGLTLQGLAFSPITGGEGNIEF
LAHWRLDGLPAAESQLEKMDYSPLIERTVQEAGQTFNNGPSRK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttccgaaggaacgcattgatgtattgcttgtagaacaaggtttttttgaaagc
cgcgaaaaagctaaagccgcgatcatggcaggtttagtgttggcggacagtgaacggatc
gagaaagcgggaatgaaggtaccccgttccagtgagcttaaagttaaaggttcggtgcat
ccgtatgtaagccgtggagggttgaagctcgaaaaggccatccgtcaattcgagctggac
atgaagggcaggacgatgctagatatcggttcatcaaccggaggctttacggattgtgcg
cttcaacatggagctcagtacgtgtatgccattgacgtggggtataatcagctggattgg
tcacttcgtaatgatgagcgtgtatgcgttatggagaaaacgaatttcagatatatgaca
cctgcggatttgagcggtcctgtgcctaatttcgcaagtattgatgtttcttttatttcg
ttacgaattattttgccgccattgcttgcattgctgcatcaacctgctgatattgtagct
ctaatcaagcctcaattcgaagctggtcgcgaaaaggttgggaaatctggcgtggttcga
gaacctgctacgcataaagaagtgttgcagaccatcttgatgtttgcacatgagcttgga
cttacgttgcagggcttggccttttccccgattacaggcggcgaaggaaatattgaattt
ttagcgcattggcgtttggatgggctcccggccgcagaatcgcagctggaaaagatggat
tacagtccactgattgaacgaactgttcaggaagcaggtcagacttttaataatggccca
tcgcgtaagtga
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