Paenibacillus polymyxa SQR-21: PPSQR21_031120
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Entry
PPSQR21_031120 CDS
T03178
Symbol
tyrS
Name
(GenBank) tyrosyl-tRNA synthetase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPSQR21_031120 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppq01007
]
PPSQR21_031120 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_031120 (tyrS)
03029 Mitochondrial biogenesis [BR:
ppq03029
]
PPSQR21_031120 (tyrS)
Enzymes [BR:
ppq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
PPSQR21_031120 (tyrS)
Amino acid related enzymes [BR:
ppq01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PPSQR21_031120 (tyrS)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPSQR21_031120 (tyrS)
Prokaryotic type
PPSQR21_031120 (tyrS)
Mitochondrial biogenesis [BR:
ppq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PPSQR21_031120 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHM66754
LinkDB
All DBs
Position
complement(3553746..3554999)
Genome browser
AA seq
417 aa
AA seq
DB search
MKWEELKPEQQAEVERQLEVIRRGVAEIVPEDELKRKVIKSVVSGEPLKIKLGLDPSAPD
IHIGHTVVMHKLRQFQELGHQVQLIIGDFTGRIGDPTGKSETRKQLTEEDVQRNAQTYKE
QIFKILDPEKTKVYYNSEWLGPMSFADVVTLSAKVTVARMLERDDFTKRYQNGLPISIHE
FFYPLMQGMDSVALQSDIELGGTDQKFNLLMGRTLQKEYGVEPQATITLPLLEGLDGVQK
MSKSLGNYIGVDEEPNEIYGKSMSVPDELMLKYFELATDITNEELAELAKGVKEGSVHPR
DAKMKLAGTLVRMYHDEEAAEAAKQHFVTVFQQRALPDDIEEFTLTADQLEEGGIRVIQL
LTHLGFAASNGEAKRSIQQGSVKINEEKWTDVNEAYKPQEGDIVQVGKRKFAKIKLG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggaagaattgaagcctgagcaacaggcagaggtagaacgacaactagaagtg
atccgtcgtggagtagcggaaattgtacctgaggatgagctgaagcgtaaggttattaaa
tcggttgttagcggcgagccacttaaaattaagctgggtctagatccgtctgcacccgat
attcacatcggacatacggttgttatgcacaaactgcgccagttccaggaattagggcat
caagtgcaactgattatcggagattttacaggcagaattggtgatccgacaggtaaatcg
gagacccgcaagcaactgactgaggaagatgtacagcgtaatgcacaaacatacaaggaa
caaatttttaagattctcgatcctgaaaagacaaaggtatactacaattccgaatggtta
ggaccgatgtcttttgcggatgtggtaactctgtctgccaaagtaacggttgcccgtatg
ttggagcgggatgattttacaaaaaggtaccaaaacggcttgccgatcagcatccatgag
ttcttttacccgctgatgcagggcatggactctgtggctctccaaagcgatatagaattg
ggaggaacagaccaaaagtttaatctgctgatgggcagaaccctgcaaaaggaatacgga
gtagaaccgcaggcgaccattacattgccactgcttgaggggcttgatggcgttcaaaag
atgagtaaaagtttgggtaactacattggtgtggatgaggagccaaatgaaatttatggt
aaatcgatgtccgttcctgatgagttgatgctgaaatattttgagcttgcaacggatatt
accaatgaggagctggcagagctggcgaaaggtgttaaggagggttcggtgcatccacgt
gatgccaaaatgaaactggccggaacattagtgcgcatgtaccacgatgaagaggcggca
gaagcggccaagcagcattttgtgactgtattccaacaacgcgcgcttcctgatgacatt
gaagaattcaccttaacagcagatcagttagaagaaggtggcattcgtgtgatccagttg
ctgactcatctaggctttgcagcatcaaacggtgaggccaagcgtagtattcagcagggg
tcggtcaaaattaatgaagagaagtggaccgatgtgaacgaagcatacaagccgcaggaa
ggcgacattgtacaggtaggtaaacggaaatttgctaaaatcaagctcggataa
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