Paenibacillus polymyxa SQR-21: PPSQR21_033090
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Entry
PPSQR21_033090 CDS
T03178
Name
(GenBank) glycosyl hydrolase family protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00520
Amino sugar and nucleotide sugar metabolism
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PPSQR21_033090
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
PPSQR21_033090
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Kisspeptin
Motif
Other DBs
NCBI-ProteinID:
AHM66948
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Position
complement(3768204..3769781)
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AA seq
525 aa
AA seq
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MLIQNPILKGFNPDPCITRVEDTYYIVVSSFEWLPGVRVYQSKDLAHWEHCTDILTDQVD
LRGNPKNCSIWAPQLSYADNLFYLLYTDVKSTKRPFKDVHNFVITAPTINGPWSEPVYLN
SSGFDPSLFHDEDGRKWLLNALWDYRMLESNKSSGIVMQEYDSSQQRLVGEPIKIFDCTP
LKKTEAPHIYRQNGYYYLVTAEGGTGTGHAVTVARSKQITGPYEVDPHNPMLTSRDLLNF
PLQCAGHGSLVETPDGEWYMAHLCTRPVEGKYAILGRETALQQVYWNDEGWLRLTAGGHT
PQLEVPAPQGTILVQQEQQKYIFEDFFEGPTLDKTWNTLRILADDSWCSLSQRPGYLRIH
AGESIQSLFQHHVLAIRQTDHHFRVETALEYQPTSYLQMAGLLLYLNEEDYLYAYVSYEE
GVGKVLRMMRCEANSFTLIPQVIALQNDLPVHLAVEVHASHAQFYYGVGDEPSWTRLFEI
QDISFLSGGFTGNFVGIAAHDMQQFQGSHADFSHFLYHGKDHLSS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttgatccaaaaccctatattaaaaggctttaatcccgatccgtgtattacgcgagtc
gaagatacttactatattgtagtgtcatcatttgagtggctgcctggagtacgggtgtat
cagtccaaagatttggctcattgggagcactgcacggatattttgactgaccaggttgat
ttgagagggaacccgaaaaattgcagcatttgggcaccgcaattaagctatgcggataac
cttttttatctgctctatacggatgtgaaaagcaccaagcgtccgttcaaggacgttcat
aattttgtgataacggcacccacgatcaacggaccgtggtcggaacccgtttatctgaat
agtagtggatttgatccatctttatttcatgatgaggatggacgcaaatggctgctgaac
gcgttgtgggattaccgcatgttggaaagcaataagtcatcgggtattgtcatgcaggag
tatgacagcagtcaacagcggcttgttggtgagcctattaaaatttttgattgcactcca
ttgaagaagacagaagcgccccacatctacaggcagaacggttattattatcttgttaca
gcggaaggtggaacgggtacggggcatgcagttaccgtagcacgctccaagcagataacc
ggcccgtatgaagtggacccgcataacccgatgcttacgtctcgtgatctgctgaatttc
cctttacaatgcgcaggacatggcagtcttgtggaaacaccggacggagaatggtatatg
gctcatttatgtacacgtccagtggaggggaaatacgccattttagggcgcgagacagcg
ttacagcaagtatattggaatgatgaaggctggctgcgattaaccgccgggggccataca
ccccaattggaggtgcctgcgcctcaagggacaatcttggttcagcaagagcagcagaag
tatattttcgaagactttttcgagggccccacacttgacaaaacgtggaacacattgcgt
atcctggcggacgatagctggtgttcattaagtcaacgcccaggctatcttcgaatccat
gctggagaatccatacaaagtctgttccagcatcacgtgcttgccattcggcaaacggat
catcatttccgggtagaaacagcactggagtatcagccaaccagctatttgcaaatggcg
ggacttttgctgtatctcaatgaagaagactatttgtatgcgtatgttagctatgaagag
ggagtgggaaaagtgctgcgcatgatgcgctgtgaagctaattcatttacgctaattccg
caagtgattgcccttcagaatgatcttcctgtacatttggctgtagaggttcatgcatcc
catgcacaattttattatggagtcggagatgaaccttcctggacgcgactttttgaaata
caggatatcagctttttgtctggaggatttacagggaattttgtaggtattgcagctcat
gatatgcaacaattccaaggaagccatgctgatttctcccacttcttataccatggtaag
gaccatctctcctcataa
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