Paenibacillus polymyxa SQR-21: PPSQR21_033540
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Entry
PPSQR21_033540 CDS
T03178
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--d-alanyl-d-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00300
Lysine biosynthesis
ppq00550
Peptidoglycan biosynthesis
ppq01100
Metabolic pathways
ppq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PPSQR21_033540 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPSQR21_033540 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PPSQR21_033540 (murF)
Enzymes [BR:
ppq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PPSQR21_033540 (murF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
EutK_C
Motif
Other DBs
NCBI-ProteinID:
AHM66992
LinkDB
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Position
complement(3817647..3819050)
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AA seq
467 aa
AA seq
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MKRTIGQIASMCGGTLHAQADAERMVEGVFTDSRRPQSLGLFVPLAGERFDGHHYVQQIV
SEGGATAYLWQKDHGTPPSVNAIEVEDTLEALQHLAAAYLRETDVSVVGITGSNGKTTTK
DIVNALLGTTFKVHKTEGNYNNHIGLPLTVLSMPQDTDILILEMGMSGRGEIRLLANIAQ
PDVAVITNIGESHLLQLGSRTEIARAKLEIASGIKPGGLLIYNGDEPLLPQVLAEPETVK
PEGLNSFTFGLAADNDDYPIEITSDEEGSSFITAQSGQEAFRLPLLGQHNVVNGLAALAV
ARHFNVDVDHIRKGLSSLKLTGMRIEVVKCSDGLTVLNDAYNASPASMKAAIQTLSAYQT
GGRKIAVLGDMLELGAEETQFHEEIGRFAAKHNIEALFTYGALGASIAQGAQGTMPTANV
HAYTDKQKLIQHLQSYLHANDIVLVKASRGMRLEEIVDALKNGPLQN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacaatcggtcagattgcatccatgtgtggaggaacacttcacgcacaggcg
gacgctgaacggatggttgagggcgtttttacagactcacgcaggccgcagagtctggga
ctgttcgttccactcgcgggtgaacgatttgatggacatcattatgttcagcagatcgta
agcgagggaggggcaacagcatatttatggcaaaaggatcatggaacacctccgtccgtc
aatgctattgaggtcgaggatacgttagaagcccttcagcatctagcggccgcatacttg
cgcgaaactgacgtttctgtcgtcggaatcacgggaagcaacggcaagacaacgacgaaa
gatattgtaaatgctctattgggcacgacttttaaagtacacaaaaccgaaggaaattat
aacaatcatatcgggttgcctttaacagtactgtccatgccgcaggatacagatatcctg
attctggagatgggcatgagtggacgcggggaaatccgtctgttggctaatattgcccaa
ccagatgtagctgtcataactaacattggcgaatcgcatttacttcagcttggttctcgc
actgaaattgctcgtgcaaagctggaaattgcaagtgggattaaacccggtggactgctt
atttataatggggatgaaccactacttccacaagtgttggcagaacctgaaacggtcaag
cctgaaggattaaattcattcacgttcgggttagctgcggacaatgatgattatccaatt
gaaatcacttcggatgaagaaggtagctcattcataacagcccaatccggccaagaggct
ttccggcttcccttgcttggacagcacaatgttgtaaacgggttggcagcgctggcggta
gcacgacatttcaatgtggatgtagaccatatacgtaaaggattgtcgtctttaaagctg
acgggcatgcgcattgaggtcgtgaagtgttcggatggacttaccgtgctaaatgacgct
tacaatgccagtcctgcttcaatgaaggctgcaattcagacgttgtctgcatatcaaacg
ggtggacgtaaaattgccgtacttggtgacatgctggaactgggcgctgaggaaacgcaa
tttcatgaggaaattgggcgttttgctgcaaagcataacatagaggcactgtttacctat
ggtgcgttaggcgcttcgattgcgcagggtgcgcaagggacaatgccaactgctaacgta
cacgcttatacagataagcaaaagctgatccagcatttgcagtcttatctccatgccaat
gatattgtgctggttaaggcatccagagggatgcgattggaagaaattgtggatgcgctg
aaaaacggtccgctacagaactga
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