Paenibacillus polymyxa SQR-21: PPSQR21_037700
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Entry
PPSQR21_037700 CDS
T03178
Symbol
rplY
Name
(GenBank) ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
KO
K02897
large subunit ribosomal protein L25
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PPSQR21_037700 (rplY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppq03011
]
PPSQR21_037700 (rplY)
Ribosome [BR:
ppq03011
]
Ribosomal proteins
Bacteria
Large subunit
PPSQR21_037700 (rplY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_TL5_C
Ribosomal_L25p
Motif
Other DBs
NCBI-ProteinID:
AHM67408
LinkDB
All DBs
Position
complement(4300873..4301514)
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AA seq
213 aa
AA seq
DB search
MSSNGGSIQLTAQPRTEKKGSAIRGLRLKGRIPAVVYGSEIEGTPVHVDAKEFNKVIRTG
RSEVFNLTVEGGETIPVIIKDYQQRDNQWLHADFLKISKNKPLRVRVSIDYQGTPVGTKS
GGILQVQETEVEVEGLPSDLPSTIEVDVSALDIGDKLSASDLKLPKGVTLHVSEEELLAS
VIVPRAVEVENAAVEGDAAATEGAEEASENKES
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaatggaggaagtattcaactaaccgcccagccgagaacagagaagaagggt
tcggccattcgtggattgaggttaaaaggacggattccagctgtggtttacggctctgaa
atcgagggaacccctgtacatgtcgatgccaaggaatttaataaagtaatcagaaccgga
cgttcagaggtttttaatctcacagtagaaggcggagaaacgattccagtcattattaaa
gattatcaacagcgtgacaaccaatggttgcatgccgactttttgaaaatttccaaaaac
aaaccgcttcgcgtgcgtgtttcgattgattatcagggtacgcctgtaggtacaaaatca
ggcggtattctgcaagttcaagaaacagaagtcgaggttgaaggtttgccttctgacttg
ccgtccactattgaagtggatgtatccgcactggatattggcgacaagctgagcgcaagc
gacttgaagcttcctaaaggcgtgacgctgcatgtctctgaagaggagttgctggcatcc
gtgatcgttccgcgtgcagtcgaagtagaaaatgctgctgtggaaggtgatgcagcggca
actgaaggtgctgaagaggcttccgaaaacaaggaatcttaa
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