Paenibacillus polymyxa SQR-21: PPSQR21_038040
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Entry
PPSQR21_038040 CDS
T03178
Name
(GenBank) histidine kinase hamp region domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02020
Two-component system
ppq02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPSQR21_038040
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPSQR21_038040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppq02035
]
PPSQR21_038040
Bacterial motility proteins [BR:
ppq02035
]
Flagellar system
Chemotaxis proteins
MCPs
PPSQR21_038040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
dCache_1
MCP-like_PDC_1
DUF5654
PspB
Ubiquitin_IARS1
DUF948
FKBP15
Swi5
Motif
Other DBs
NCBI-ProteinID:
AHM67442
LinkDB
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Position
complement(4345732..4347981)
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AA seq
749 aa
AA seq
DB search
MGFRKKEGNTAKRQPKKKDQMKGLKGSKVTTDKGEETVVMSSKGTPWVAEVLRKCTNNLK
RLLKPERYSKDFMHLVKNYNPIRSVGMKLFLIFFAAIMLFVVSLGMLSYYRAKSTIEQNA
ATAYQQTVQQTSEKLDIILERFQDTSTQVFFDTELSDQLQKAVKQDKNPFASFVAMGEVN
KKLTNIAFTNKAIDSLYLYPEETSLAAMGTGTQKDVRQEAWFNDILKNKGMVWLPTQVND
NGSKTFRLARSMNSMSGLGGTYVLVMDLKASAVEDELKGVNLGSGSMISLVTDKGEFVGS
NNESLAGGKTKLDYVSKLEGIEGNQIMEQVADGKEQSVLTVHNTLGTSKWILVGVVPVSE
LVRDAKGILTTTWVFAAVAALIALFIGLWIVRLVARPLTHLKDLMIEGAKGNLQIRTNYK
AQDEIGQLSASFDTMMEQITLLVEQTNASAQEVLNTATELSDASKKTAVSAKEIAAATEE
IAHGATSLATEAERGSGLTGNISQQMDTVMTSNYEMSLVAQEVEQSSEKGTIQLKNLLSK
TKVTEETTHALVGKVDELKKTTSDVFKVLDVLQDIAKQTNILSLNATIEAARAGTAGRGF
MVVANEVRQLAEQSRQAIRTATGITNNIVNEMNETVQALSEVYPLFREQMGAVRETTDIF
QSVQQQMGEFALRLGTVTASIHHLSESQTTLSEAMTNVSAVAEQSSATSQEVASLSNEQA
NIGNQLVGLSDKLEGVSVNLKEQLSRFTV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcggaaaaaagaggggaatacagcaaaaaggcaacccaagaaaaaggatcaa
atgaaaggtttaaaaggaagtaaagtaacaacggataaaggggaggagacggttgtgatg
tcttcgaagggtactccctgggtagctgaggtcttacgtaaatgcacaaacaatttaaag
cgtttacttaagcctgaaagatacagtaaggattttatgcatttagtcaaaaactataat
ccgatccgttcggttgggatgaagttgtttctgatcttttttgcggccattatgttattt
gtggtcagcttgggaatgctctcgtactacagagctaaaagcacgattgagcaaaatgca
gctacagcgtatcagcaaacggttcagcaaacttcggaaaagcttgatattattttagag
cgctttcaagacacatcgacacaggtatttttcgatactgaattaagtgatcagttgcaa
aaggctgtaaagcaagataaaaatccctttgcatcttttgttgctatgggagaagtaaac
aagaaattaaccaatattgcttttacaaataaagcgattgattcattgtatttgtacccg
gaagaaaccagtttagctgcaatgggtaccggaacacaaaaggatgtacggcaggaagca
tggtttaacgatattttgaaaaacaagggaatggtttggctacctacgcaggtgaatgac
aatggcagcaagacctttcgtctggcacgatccatgaacagcatgtccgggttgggaggg
acttatgttctggttatggatttaaaggccagtgcggtggaggacgagttgaaaggtgtt
aatttgggctcaggcagtatgattagccttgtgacagacaagggggagtttgtaggttct
aacaatgagagcttggccgggggtaagacaaagctggattacgtttccaagcttgaaggg
atcgaaggaaatcaaattatggagcaggtagcagatggcaaagagcaaagtgtgcttacg
gttcataatacactgggaacttccaaatggattctcgtgggtgtagtacctgtatccgag
ctggtgagagacgctaaggggattctaactacgacctgggtatttgctgcggtggctgca
ctcattgcattgttcatcggcctgtggatcgtgcgcctcgtggctcgtccactgacacac
ctgaaggatttaatgattgaaggcgccaaaggcaacttgcaaatccgaacgaactataag
gctcaggatgaaattgggcagttgtccgctagctttgatacaatgatggagcaaattaca
ctgctggtagaacagacgaatgcatcagcacaggaggtactgaatacagcgacggaactg
agtgatgcctcgaagaagacagccgtttcagccaaagaaattgcagctgcgacggaagag
attgctcatggtgccaccagtttagcaacagaggcggaacgtggtagcggattaacgggg
aatatatcccagcaaatggatacggttatgacttctaattatgaaatgagtctggtcgca
caagaagttgaacagtccagtgaaaaagggacaattcagctgaaaaatctattgagcaag
actaaggttacggaagaaactacgcatgctttggtaggcaaagtagatgaactgaagaag
acaacttccgatgtctttaaggtgctggacgtattgcaggatattgctaaacaaacgaac
attctatccctgaatgcgacgatagaagcggcacgagcagggacagccgggcgtggtttt
atggtggttgcaaatgaggtccgtcagttggcagaacaatcacgtcaagccattcgtaca
gctacaggtattacgaataatatcgtcaatgagatgaatgaaacggtacaggcgttatct
gaagtgtacccgctgttccgagagcagatgggagccgtacgagaaacgacggacattttc
caatcggtgcagcagcaaatgggcgagttcgcgcttcggttgggaacagtcaccgcctcc
attcatcatctgagtgaatcgcagactactttgtctgaggcaatgaccaatgttagtgcg
gtggccgagcaatcctctgctacttcgcaggaagtcgcttctctcagtaatgagcaggcc
aatatcggtaatcagctggtaggcttgtctgataagctggaaggagtttcagtgaatttg
aaagaacagctttcaaggtttacagtgtag
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