Paenibacillus polymyxa SQR-21: PPSQR21_038290
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Entry
PPSQR21_038290 CDS
T03178
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPSQR21_038290
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppq01007
]
PPSQR21_038290
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_038290
03029 Mitochondrial biogenesis [BR:
ppq03029
]
PPSQR21_038290
Enzymes [BR:
ppq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PPSQR21_038290
Amino acid related enzymes [BR:
ppq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PPSQR21_038290
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PPSQR21_038290
Prokaryotic type
Other AARSs
PPSQR21_038290
Mitochondrial biogenesis [BR:
ppq03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PPSQR21_038290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
Motif
Other DBs
NCBI-ProteinID:
AHM67467
LinkDB
All DBs
Position
complement(4376294..4378072)
Genome browser
AA seq
592 aa
AA seq
DB search
MKRSHQCGALTHAHIGETVTLNGWVQTRRDLGGVLFIDLRDRSGIVQIVFNPAYSGEALQ
IADRVRSEYVLEVTGTVVKRDAETINTNLPTGEIEVRVTEIEVLNASKTPPFFIEDGVEV
DESLRLKYRYLDLRRPEMHQTLKLRSKAAKVFRDFLDGEDFIEVETPILTKSSPEGARDY
LVPSRVHEGEFFALPQSPQLYKQLLMVGGLERYYQVARCFRDEDLRADRQPEFTQIDIET
SFMQQDDLLPMMERLMVKLFKETVGVELETPFQRITHAEAMDKYGSDKPDLRFGLELINV
NDIVATSGVKVFASVIEKGGEVKVLNAKGCGTWSRKDIDDLGPFAARYGAKGLAWIQVKE
GEFKGPIVKFFTPEEIEALKERTGAEEGDLLLFSADNKKVVADVLGALRLKIGRHLGLID
DNKFKFAWVVDFPLLGYDEEQKRYVAEHHPFTRPKEEDLALLDTDPGQVRAQAYDIVLNG
YEVGGGSMRIFKREVQEKMFKALNLPPEEVKDKFGYLLDAFEYGTPPHGGIAFGFDRLVM
LLAGRTNLRETIAFPKTASATDLLMDAPAEVDQAQLDQLHIRLAPKPVAPKA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggagtcatcaatgcggcgcattgactcatgcgcatatcggagaaacagttaca
ttgaacggttgggtacagacccgtcgtgacttagggggcgtactttttatagatttgcgt
gaccgtagcggaattgtacaaatcgtgtttaatccggcctattccggtgaagcactgcaa
attgcggatcgtgttcgcagtgaatatgtgcttgaggttactggtactgttgtcaaacgt
gatgcagaaacgatcaatacgaacctgcctacaggtgagattgaagtgcgtgtcactgaa
atcgaagtattgaatgcatccaaaacacctccgttcttcattgaagacggcgtagaagta
gacgagtcgctgcgtttgaaataccgttatctggacctgcgtcgtccggaaatgcatcag
acgttgaaactgcgttccaaagcagcaaaagtattccgcgacttcctggacggtgaagat
ttcattgaggtagaaacaccaattttaacgaaaagctccccagagggtgcacgtgactat
ctggtgcctagccgagtgcatgaaggcgaattttttgccttgccgcaatcgccacaattg
tacaagcaattgctgatggtaggcggcctggagcgctactaccaagtggcacgttgtttc
cgtgatgaagatttgcgtgctgaccgccagcctgaatttacgcagatcgacattgagact
tccttcatgcaacaggatgacttgctgcctatgatggagcgtcttatggtgaaattgttc
aaagaaacagttggggtagaactggaaaccccgttccaacggattacacatgcagaggca
atggacaagtatggttctgacaagcctgacctgcgttttggtcttgagttgataaatgtc
aatgatatcgtggcaaccagtggggtaaaagtatttgcttccgtaattgaaaagggtggc
gaagttaaagtccttaatgccaaaggatgtggcacgtggagccgtaaggacattgatgac
ctgggtccttttgcagcacgttatggagcaaagggcttggcttggatccaagtgaaagaa
ggcgaattcaaggggcctatcgttaaattcttcacaccggaagaaatcgaagccttgaaa
gagcgtacaggagccgaagaaggcgacctgttgctgttctctgcggataataaaaaagta
gttgctgatgttttgggcgcgcttcgtctgaaaattggccgtcatttggggctcatcgac
gataacaaattcaaatttgcctgggtcgtagacttcccgcttctgggctatgacgaagaa
caaaaacgttatgtagcggagcaccatccgttcactcgtccgaaggaagaagatctggcc
ctcttggacacagatccaggtcaagttcgtgctcaggcctacgacatcgtgctgaatggc
tacgaagtgggtggcggctcgatgcgtattttcaaacgtgaagttcaggagaaaatgttc
aaagcgctcaatctgccgcctgaagaagtgaaggataaattcggttacctgctggatgca
tttgaatacggtacgcctccacatggtggtattgccttcggttttgaccgtcttgttatg
ttgcttgcaggtcgtacaaatctgcgtgaaaccattgcattcccgaaaacggccagcgcg
acagacctgcttatggatgcaccagccgaagtggatcaagctcaattggatcagcttcat
attcgtcttgctccgaagcctgttgcacctaaagcttaa
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