Paenibacillus polymyxa SQR-21: PPSQR21_039160
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Entry
PPSQR21_039160 CDS
T03178
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPSQR21_039160 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppq01007
]
PPSQR21_039160 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_039160 (valS)
Enzymes [BR:
ppq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PPSQR21_039160 (valS)
Amino acid related enzymes [BR:
ppq01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PPSQR21_039160 (valS)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPSQR21_039160 (valS)
Prokaryotic type
PPSQR21_039160 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF5915
tRNA-synt_1f
tRNA-synt_1b
CCDC-167
YlqD
Motif
Other DBs
NCBI-ProteinID:
AHM67540
LinkDB
All DBs
Position
complement(4448071..4450737)
Genome browser
AA seq
888 aa
AA seq
DB search
MSEQDNKTTLEMPTTYDPKSAEQKWYKTWMEKGYFRAGQHPEAEPFTIVIPPPNVTGMLH
IGHALDFTLQDIIIRAKRMQGYDALWLPGADHAGIATQTKVEQKLREEGLTRYDLGREKF
LEKVWEWKDLYLDNIHNQWEKMGFSLDYSRERFTLDEGLSKAVREVFVKLYKKGLIYRGK
RIINWDPAARTALSDIEVEYKEVNGNLYHLQYPLKDGSGFITVATTRPETMLGDTAVAVH
PEDERYKQMIGKTLVLPIIGREIPVIADDYVDKDFGSGAVKITPAHDPNDFEMGQRHQLP
QITVMDETGTMNAEAGKYQGLDRSDCRKQIVADLKEQGVLIRIEEHVHQVGHSERSGVVV
EPYLSTQWFVEMKPLAAKAIEAQKAGNGVNFVPDRFERTYLHWIENVRDWCISRQLWWGH
RIPAWYDEETGEVIVSAEDPTTLPEYAGRKLKQDEDVLDTWFSSALWPFSTLGWPEQTED
LKRYYPTNVLVTGYDIIYFWVSRMIFTALEFTEEIPFKDVLMHGLVRDADGRKMSKSLGN
GVDPLDVIDQYGTDAMRYMISTSSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEG
VTAADIDITGDLSTVDRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDLCDWYIE
FAKLSLYGDNAEAKKKTQSVLAYVLDRTLRMIHPFMPFISEEIWQHLPHEGETITLAAWP
AYDPAFEDKDAVAEMNLLIDVIRAVRNIRAEVNVPMSKKIELLIKPGDQAVLDIINRNGE
YVRRFCNTSEFDAGLEFTAPDKAMTSIVSGAELYLPLAGLLDIAQEISRLEKELQHLNSE
VERVEKKLSNQGFVAKAPAKVIEEEKAKQADYSDKRAKVIARIEELKG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagacaacaagacaaccttggaaatgccaacaacgtacgatcccaaatca
gcagaacaaaaatggtacaaaacgtggatggagaagggctatttccgtgccgggcaacat
ccagaggcagagccttttactatcgttattccaccaccgaatgttacgggtatgttgcat
attggacatgctcttgactttactttgcaggatattattatccgcgccaagcggatgcag
ggttatgatgccttgtggctgccaggggcagaccatgcaggtattgctactcaaacaaaa
gtagagcagaagctacgtgaagaaggtttgactcgctatgatttgggccgtgagaagttt
ttggagaaagtgtgggagtggaaagatctttatttggacaatatccacaatcaatgggag
aaaatgggtttttctctcgattattctcgtgaacgttttacattggatgagggactgtcc
aaagcggtacgcgaagtattcgttaaactgtacaaaaagggtctgatttatcgcggtaaa
cgcatcattaactgggaccccgctgcacgtaccgcattgtcggatattgaggtggaatac
aaagaggtgaacggaaatctgtatcacctgcaataccctctgaaagacggtagcggattt
attactgtagccactacacgccctgaaacgatgctgggcgatacggctgtagctgtacat
ccagaagatgaacgctataagcaaatgatcggcaaaacgcttgtgcttccaatcatcggg
cgtgaaattccggtcattgcggatgactatgtagataaagatttcggtagcggcgcggtt
aaaatcacaccggctcacgatccgaatgactttgaaatgggtcaacgtcaccagttgcct
caaattacggtgatggacgagacgggaacgatgaatgctgaagcaggcaaatatcaggga
ctggatcgcagcgattgccgtaagcaaatcgtcgctgatttgaaagagcagggtgtactg
attcgtattgaagagcatgtacaccaagtaggtcatagtgagcgttctggcgtagttgta
gaaccttatctgtcgacgcaatggttcgtggaaatgaagcctctggcagctaaggcgatt
gaagcacagaaggctggcaacggtgtaaactttgtaccggatcgctttgagcgtacttat
ctgcattggattgaaaatgtgcgagattggtgtatttcccgtcaattatggtggggacac
cgtattccggcttggtatgatgaggagaccggagaagttattgtatcggcggaggaccct
accactttgcctgaatatgccggtagaaagctcaaacaggatgaggatgtactcgatact
tggttcagctctgctttgtggccgttttcgaccctaggttggcctgagcagacagaggat
ctcaaacgctattatccgacgaatgttctggtgacaggctatgacattatttatttctgg
gtatcgcgtatgatctttaccgcgctggagttcacggaagagattccgttcaaggatgta
cttatgcacggtttggttcgtgacgcggacggaagaaaaatgtccaaatccctgggcaat
ggtgttgatccgctcgacgtgatcgaccaatatggtaccgatgcaatgcgttatatgatc
tccaccagcagcacacctggacaagatcttcgtttccgctgggaacgtgtggagcaggcg
cgtaactttgccaataaaatctggaatgcatcacgctttgcgctgatgaatctggaaggc
gtcactgcggcagatatagacattactggtgacttgagcaccgttgaccgttggattctg
caccgtctaaacgaaacttcacgcgacatcacgcgtctaatagatgcttatgaatttggc
gagacaggccgccttctgtataactttatttgggatgatttgtgcgactggtacattgag
tttgcgaagctttccctatatggcgataatgcagaggcgaaaaagaaaacacaatcggta
cttgcatacgttttggatcggacactgcgcatgattcatccgttcatgccgtttatctcc
gaggaaatatggcagcatcttccgcatgagggagaaacgatcacactggccgcttggcct
gcttacgatcctgctttcgaggataaggacgcggtcgctgaaatgaatttgctgatcgac
gtgattcgtgctgtgcgcaatatccgcgctgaagtcaacgtgccgatgagtaaaaaaatt
gaattgctcataaaacccggcgatcaagccgttcttgatatcattaaccgcaatggggag
tatgtacgtcgattctgtaacacgtctgaattcgacgcaggcttagagttcaccgctcca
gataaagccatgacatctattgttagcggcgcagagctatacctgccgttagccggactg
ctagatattgcccaggaaattagcagacttgaaaaagaacttcagcatttgaacagtgaa
gtggagcgcgtggagaaaaaactctccaaccaaggctttgtggcgaaggcaccagccaaa
gtcatcgaggaagagaaggccaagcaagccgattactcagataagcgcgctaaagttatc
gcacgtattgaagaactcaagggataa
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