Paenibacillus polymyxa SQR-21: PPSQR21_039170
Help
Entry
PPSQR21_039170 CDS
T03178
Name
(GenBank) peptidoglycan-binding lysin
KO
K06417
stage VI sporulation protein D
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
PPSQR21_039170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOCS_spoVID-N
LysM
LysM_RLK
Yop-YscD_ppl_3rd
DUF434
Motif
Other DBs
NCBI-ProteinID:
AHM67541
LinkDB
All DBs
Position
complement(4451172..4452503)
Genome browser
AA seq
443 aa
AA seq
DB search
MNKQQNDQPQGLRFDIYERIHLTEEAAGIAELEEIELLPRIQVVTHGDHAALRGHLLLEG
VYRTPEQMTSELHHLIPVEITIPLNRVGRLEDISVEIENFDVDLLSLRSLNITGVLSLHG
VESSHAEETAVWLDEEFTVVHAPEHPAPSLYGAGEHRHEEVYSTQDSVYNNISDPETSYK
VPAQQESAYWEQSSEDQGEQKPSLEHQAYDPIVDPNRYYEPWTGKVVEDSSSEVKHEQEA
SEVWAFQQEEAETEGNEPKVSSASPNVAYDPLLSEPHSATESEIYLEPQLEASQANDFDF
RPEASEQVNHEVQDTFTEEKPEMRVALNSKKNEGADEPDPVVYSSLLQSSRSVKEAEHQQ
QLEHEPQGQDQKAEEEREDAKWKNLFFHTQDETPFRKVRLCIVQREDTLETIADRYQLST
RELQLYNRLAEHHVEEGQVLYIP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaacaacagaatgatcagccgcaaggcttgcgttttgatatctatgaacgcatt
catttgacggaggaagctgccgggattgccgagttggaggaaattgagcttctgccacgc
attcaggttgtaacccacggcgaccatgccgctttgcgagggcatttgctgctggagggc
gtgtaccgcacacctgaacagatgacgagcgagcttcatcatttgatccctgtggaaatt
accattccgcttaaccgggtaggaagattggaagatatctccgtggaaattgaaaatttt
gatgtggacctgctctctttacgtagtctaaacattacaggggtgctttctttgcatggg
gtggaaagctcgcatgcagaggagacggcggtttggctggatgaggaatttactgtggtg
catgcacctgaacatccggctccatctctttacggcgctggagagcatcgtcacgaagag
gtttattctacccaagactcggtatacaacaacatttcagacccggaaacttcatacaaa
gtaccagcacaacaagagtcagcttactgggaacagtcgtcagaggatcaaggggaacag
aagccatcattggagcatcaagcttatgatccgatagtagatccgaaccgatattatgag
ccgtggacgggaaaagtagttgaagacagctcttccgaagttaagcatgagcaggaggcg
tcggaagtgtgggcatttcagcaagaggaagcagagacggaagggaacgagcccaaagta
tcctctgcatctcctaatgtagcatacgaccctttgctgtcagagccacattctgccaca
gagtcggagatttatctggagccgcagttggaagcaagtcaggcgaatgactttgacttc
aggcctgaagcgtcagaacaggtaaaccatgaagttcaggatacctttactgaggaaaag
ccagagatgcgcgtggcgcttaacagtaaaaagaatgaaggagcagacgagccggacccg
gttgtctactcatcattgcttcaatccagccgttcggtgaaggaagccgaacaccagcag
cagctggaacatgaaccgcaaggtcaggatcagaaagccgaggaagagcgtgaggatgcc
aagtggaaaaatctttttttccatacacaggatgaaacgcctttccgcaaggtgcggtta
tgcattgtacagcgcgaggatacactggaaacgatagcagaccgttatcagctcagcaca
cgggagcttcaattgtataatagattggcagagcatcatgtagaagaagggcaggtattg
tacatcccttga
DBGET
integrated database retrieval system