Paenibacillus polymyxa SQR-21: PPSQR21_041070
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Entry
PPSQR21_041070 CDS
T03178
Symbol
frdB
Name
(GenBank) succinate dehydrogenase and fumarate reductase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00020
Citrate cycle (TCA cycle)
ppq00190
Oxidative phosphorylation
ppq00650
Butanoate metabolism
ppq00720
Other carbon fixation pathways
ppq01100
Metabolic pathways
ppq01110
Biosynthesis of secondary metabolites
ppq01120
Microbial metabolism in diverse environments
ppq01200
Carbon metabolism
Module
ppq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPSQR21_041070 (frdB)
00650 Butanoate metabolism
PPSQR21_041070 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PPSQR21_041070 (frdB)
00720 Other carbon fixation pathways
PPSQR21_041070 (frdB)
Enzymes [BR:
ppq01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PPSQR21_041070 (frdB)
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Paralog
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_4
Fer4_21
Fer4_13
Fer4_3
LdpA_Fe-S-bd
Motif
Other DBs
NCBI-ProteinID:
AHM67729
LinkDB
All DBs
Position
complement(4659472..4660239)
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AA seq
255 aa
AA seq
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MSEQAVKSNKTVKFVVTRQDEPNASSYTEEFELAYRPGMNVISALMEIQRNPVDSQGKET
APVCWESNCLEEVCGACSMVINGKPRQACAALVDKLEQPITIAPMSTFPVVRDLVIDRSR
MFNALKKVKAWIPIDGTYDLGPGPRMAEKKRQWAYELSKCMTCGVCLEACPNVNEKTTFI
GPAAISQVRLFNSHPTGEMNQEERLDALMTDDGLEGCGNSQNCVRSCPKGIPLTTSIAEM
NKQTTKHMFKRWLTV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcaagcagtgaagtcgaataaaacagtgaagttcgtggttactcgtcaggat
gagcctaacgctagttcttatacggaagaattcgaattggcctacagaccgggaatgaac
gtgatcagcgcgctgatggaaattcagcgtaacccggtagacagccaaggtaaagagacg
gctccggtgtgctgggagtcgaactgcctggaggaagtatgtggagcttgctccatggtg
attaacggcaaaccgcgtcaggcgtgtgcggcgcttgtcgataagctggagcagccgatt
acgattgcgccgatgagcacattcccggtcgtacgggatttggtcattgaccgcagccgg
atgtttaacgcgctcaagaaggtcaaagcgtggattccgattgacggtacctatgatctg
ggaccgggtcctagaatggcagagaaaaagcgtcagtgggcgtatgagctgtccaagtgc
atgacctgtggtgtctgtctggaagcatgtccgaacgtcaatgagaagacgacgttcatt
ggacctgcggcgatatctcaggttcgcctgtttaacagccatccgacaggggaaatgaat
caggaggagcgcctggatgcattgatgacggacgacgggctggagggctgtggtaattcg
caaaactgcgtacgctcttgcccgaaaggcattccattgacaacttccattgccgaaatg
aacaagcaaacgaccaagcatatgttcaagcgctggctgactgtgtag
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