Paenibacillus polymyxa SQR-21: PPSQR21_041090
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Entry
PPSQR21_041090 CDS
T03178
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase subunit c
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00020
Citrate cycle (TCA cycle)
ppq00190
Oxidative phosphorylation
ppq00650
Butanoate metabolism
ppq00720
Other carbon fixation pathways
ppq01100
Metabolic pathways
ppq01110
Biosynthesis of secondary metabolites
ppq01120
Microbial metabolism in diverse environments
ppq01200
Carbon metabolism
Module
ppq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PPSQR21_041090 (sdhC)
00650 Butanoate metabolism
PPSQR21_041090 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
PPSQR21_041090 (sdhC)
00720 Other carbon fixation pathways
PPSQR21_041090 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Baculo_p26
MCP1_TM
Motif
Other DBs
NCBI-ProteinID:
AHM67731
LinkDB
All DBs
Position
complement(4662098..4662772)
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AA seq
224 aa
AA seq
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MRGFYSRKLHSLLGVIPLALFFVEHLVTNFTAVEGGKEGFNRSVAFLNGLPLVIVLETLF
IYLPLLFHGIYGLYIAYQADPNVKRFGYSRNWRFLFQRISGVITFVFIIWHVYDTRFQVA
LGNVTHEELGGVMHGIVTNPVYFILYLISVVSASFHFANGLWAFMVSWGITVGPRAQKVS
SYICMTLFVVVSIGFVASLLAFRSAEFQETATALVQCSAFKQLL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattttattccagaaagctgcattcgcttcttggcgtcattccattggctcta
ttttttgttgagcatttggtgacgaacttcacagcggtggagggcggcaaggaaggtttt
aatcgcagcgtggccttcctgaatggtttgccgctggttattgtgttagaaacgttattc
atctacttgccattactgttccacggaatctatggcttgtatatcgcttatcaggctgac
ccgaatgtcaaaaggtttggctattcgcgtaactggcgctttttgttccagcgtatttcc
ggcgtcattacgtttgtatttattatctggcacgtatacgacacacgctttcaggtggcc
ctgggtaatgtaactcatgaggagctaggcggcgtaatgcatggtatagtgacgaaccca
gtctattttattttgtatttaatcagtgtcgtttcggcatcatttcactttgctaatgga
ctgtgggcatttatggtcagttgggggattaccgtgggaccacgtgcccaaaaagtatct
tcctatatctgtatgaccctgttcgtggtggtgtcgatcggcttcgttgcttccctgctt
gcatttcgcagcgcggaattccaggaaacggcaacagccttggtgcaatgcagcgccttt
aaacagctactgtaa
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