Paenibacillus polymyxa SQR-21: PPSQR21_042340
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Entry
PPSQR21_042340 CDS
T03178
Name
(GenBank) multidrug-efflux transporter
KO
K08153
MFS transporter, DHA1 family, multidrug resistance protein
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_042340
Transporters [BR:
ppq02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
PPSQR21_042340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
MFS_2
Sugar_tr
MFS_1_like
MFS_3
LacY_symp
TRI12
Motif
Other DBs
NCBI-ProteinID:
AHM67856
LinkDB
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Position
complement(4787816..4789042)
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AA seq
408 aa
AA seq
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MSILTRNRGAMLLLMLNIFLAFMGIGLVVPVLPKFISELGMNGSSMGLMVAAFALTQLLL
SPMSGKLSDRYGRKKLIVSGMFIFMLSELVFGVAGSVPTLFVARIMGGVGAALLTPSIMA
YVADVTSFEERGKGMGMINAAINTGFIIGPGIGGLLAAYGIRIPFFAAAGAAGIAAILSL
FVLPESLSKEKQQYNRELPREKENLLQQFAKSYQSPYFMGLLIVFVVAFGLANFETVFGL
FVDHKYGFSPMDIAIIITTGSILGAVVQATIFGWIINRFGEKKVIHLCLAIGGLFIFLTL
FAEQYVMIMLTTFIIFLAMDILRPAVSTSLSRQAGDEQGFVAGMNSSYTSLGNVIGPLVA
GLLFDVHINLPYMVAAVALFACLVLSLRSKHAGKRHSTTLAAEQRRSG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtctatactaacaagaaatcggggagcaatgctgttattgatgcttaacattttttta
gcattcatggggattggattagtcgttcctgttttacctaaatttataagtgagctaggg
atgaacggttcttcaatgggactaatggttgcagcctttgcgctgacacagcttttatta
tcacctatgtcaggaaagttgtctgaccgttatggacgtaaaaagttgattgtttctggg
atgtttattttcatgctgtcagagcttgtttttggagtggcgggttccgttcctaccttg
tttgttgcacgaatcatgggcggggtaggggctgcgttgcttactccctctataatggcc
tacgtcgctgatgtgacctcatttgaggaaagaggcaagggtatgggcatgattaatgca
gcgattaacacaggcttcataatcgggccagggattggcggtttgcttgcagcctatgga
atacgtattcccttctttgcggcggcaggtgctgcaggaatagcggctattttgtctctg
ttcgtgctgcctgagtctttgagcaaggaaaaacaacagtacaatagagagcttccgcgt
gaaaaagaaaaccttttacagcaatttgccaagtcctatcaatctccgtatttcatgggc
ttgctcattgtatttgtcgttgcttttggattggcgaattttgaaacggtatttggactg
tttgttgaccataaatatggtttttcaccgatggatattgccatcattataacgacagga
tctattttgggggcagttgttcaagcaactatatttggttggatcattaaccgttttggt
gagaaaaaagtaattcacctttgcttggctattggaggactgtttattttcctaacttta
tttgccgagcagtacgtgatgattatgctgacgacttttatcatttttctggctatggat
atccttcgcccagcagtaagcacttctctatcgcggcaggctggggatgagcaagggttt
gtagcgggtatgaactcgtcctataccagcttggggaatgtaattggaccgttagttgca
ggactgctgtttgatgttcatattaatttgccttatatggtggcagcggtagccttattt
gcttgcctcgttctttcactacgctctaagcatgcaggaaagcgacactcaacaaccctt
gcagcagagcagcgtagaagtggttag
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