Paenibacillus polymyxa SQR-21: PPSQR21_042940
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Entry
PPSQR21_042940 CDS
T03178
Name
(GenBank) sensor protein
Organism
ppq
Paenibacillus polymyxa SQR-21
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
4HB_MCP_1
HisKA
GAF_2
GAF
cREC_REC
HMMR_N
HAUS-augmin3
Mce4_CUP1
HAMP
Snu56_snRNP
Motif
Other DBs
NCBI-ProteinID:
AHM67899
LinkDB
All DBs
Position
complement(4830273..4833989)
Genome browser
AA seq
1238 aa
AA seq
DB search
MKIRNKLLIGFGSLMAILLVLTLISYDRMGSLNEQLNQVYQERYVKVRKTTAIRGQVNDM
AKVMANLILNPGSSVSEAKREMDDISATGTKVLASLQTDSGTSEEQQQIDRVAVAWKDYL
NYEERLVSLLEQDRIEEANAFRNSTGLPAQEEAMDSINTLAVFQDREIDNDMKQANQAYE
ESVQITTILMAAGLMMGLLVILWVLPSIAKGLNTVNLMMNGFGKGKYRAISRMSVASKDE
IGEVARVFQQLAGDLDEKRKFEHSVLQTQKDQTWLNANTARLTELFRGVNSLEQVAQMFI
SEFTPILGGSYGAIYLQGKEVEDNRFKLYGSYAKVTGEGSIRDAIQVGEGLLGQCVLDRK
PILITEAPEGYLSIGSALGESKPVGIMIFPIMFDDECIGAVEIASLDRFSDLETKLFAQL
VESLGIILNNIKGRMRVEQLLRESQALTEELQCQSEELQTQQEELKRSNENLEQQTEELK
RSEELLQRQQEELEHFNTELIAKTRALEEQVREVEEKNDEIERARAQLEQQAMQLGITSK
YKSEFLANMSHELRTPLNSLLILSQLLSENKEGNLKPKQVEYAQTIYMSGADLLKMIDEI
LDLSKVDAGKMDINHETVHLKELELFVEQNFAPVAAKRELKLHTEIDENLPDAIISDGYR
LKQILRNLLSNAFKFTTEGSISFKVSRANGEQLPGMLNPRKSYLALSVRDTGIGIASDKT
DLIFEAFQQVDGTTSRKYGGTGLGLSISRELSKLLGGAITVESEQGQGSCFTLYLPEQTP
TEKNMDSHSREALNSADVPPAFEGAAASAEADLPMIMPAERLPVYQIPAKSGAEDIHPGD
DRNEITPQDKVLLIIEDDINFANILYDMARSRGFKALIALKGDDGLNMAHSYLPDAIILD
IQLPVMDGWSILGELKGNSSTRHIPVHVISVIDDVKQGLMMGAIAYLKKPSSKESLDKAF
SHIKSYTDQMVKRLLVVEDDDNQRKSIIELIDHDDVAITAVSTGKEALNELATQRYDCMV
LDLMLSDMTGFELLDRIRENEQLTDLPIIIYTGKDLDSKEETQLRKYAESIIIKDVKSPE
RLLDETTLFLHRVEANLPEDKRKILQKLYNKEELFEGKKILLVDDDIRNVFALSSVLESY
RMEVTFAENGREALELLEQTPDFDLVLMDMMMPEMDGYEAMRRIRLMPQFEKLPIIALTA
KAMKDDRSKCIEAGASDYVKKPIQTEQLLSLMRVWLYS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagaaataaactgctgattggctttggatcgcttatggcgatcctccttgtg
ctgacgctaatcagctatgaccggatggggagcttgaatgaacagctgaaccaggtttac
caagaacgatatgtgaaggtccggaaaacaacggctatacgcggacaggtgaacgatatg
gctaaagtcatggccaacttgatcttgaatccaggctcctctgtcagcgaggccaagcgc
gagatggatgatatttctgctactggaacaaaagtgctggctagtctgcaaacggattcc
ggtacgagtgaagagcaacagcagattgaccgggtggctgtcgcctggaaagattatcta
aactatgaagagagactcgtttccttattggagcaagatcgtattgaggaagctaatgct
ttccgtaatagcacgggtctgcctgctcaagaggaggcaatggacagcattaatacccta
gctgttttccaagaccgggaaattgataacgatatgaagcaggccaatcaggcttatgag
gaatctgtgcagattaccacaatcctgatggcggccggtctgatgatgggcttactggtt
attttgtgggtgcttcctagcattgccaaaggtctaaataccgttaacctcatgatgaac
ggttttggcaagggaaagtacagggctatcagccggatgagtgtggcctccaaagatgaa
atcggagaggttgctcgtgtgtttcaacaattggctggagacctggatgaaaaaaggaaa
ttcgagcattccgtccttcaaacgcagaaggaccaaacttggcttaatgccaatactgct
cgattgactgagctgtttcgcggtgtgaattcactggagcaggttgctcagatgttcatt
agtgagtttacacccattttggggggcagctatggagccatctacctgcaaggaaaagag
gtagaagacaatcggttcaagttatacggctcctatgcaaaggtgactggcgaaggctcg
atcagagacgctatccaggtgggcgaaggtttgcttggacagtgtgttctggatcgtaag
ccaatcttgatcacagaggcacctgaaggatacttgtccattggctccgccttaggagaa
agtaagccagttggaattatgattttccctattatgttcgatgatgaatgcattggtgcc
gtggaaatagcgtcattggaccgcttcagtgatctggaaacgaagctgtttgctcagtta
gtggagagtttgggaatcattttgaacaatatcaagggacggatgcgggttgagcaactg
ttgcgcgaatcacaagcacttaccgaggaattgcaatgccagtccgaagagttgcaaact
cagcaagaagagctcaagcgttctaacgagaatttggagcagcaaacagaggagcttaag
cgttccgaggaattattacagcgtcaacaggaagaattggagcattttaatactgaactg
attgctaaaacgagagcactggaagaacaggttcgagaagtggaagaaaagaacgatgag
atcgaacgtgcacgagcccagttggagcaacaggcgatgcagcttgggatcacaagcaaa
tacaaatccgagtttttggccaatatgtcgcatgaattgcgtactccgctaaatagcttg
cttattctttctcagctgctgtctgagaacaaggaaggcaatctcaagcccaaacaagtt
gaatatgcacaaaccatttatatgtcgggcgcggatttgttgaaaatgattgatgaaatt
ctggatttatccaaagtggatgctggaaaaatggatattaaccatgaaacggtccatttg
aaggaactggagctgtttgtagaacagaattttgctccagtcgcagccaaacgagagctt
aaactgcataccgaaatcgacgagaatttgccagatgctattataagtgacggttatcgt
ctcaaacaaattttacgtaacttactgtccaatgcgttcaagttcaccacggaaggttct
ataagtttcaaggtatctcgggcaaatggagagcagcttccgggtatgctaaatccacga
aaatcctatctggctctatctgtgcgtgataccggcatcgggattgcttcagataagaca
gatctgatcttcgaagccttccagcaggtagacggtacgactagccgaaaatacggggga
acagggctggggctgtcgatcagccgtgagctttccaaattgttgggcggtgccattaca
gtcgaatccgagcagggacagggcagttgctttacactgtatttgccggaacaaacgcct
accgaaaagaatatggattctcattcgagagaggcgcttaacagtgcagatgtgcctccg
gcttttgaaggcgccgctgcttcagcggaagcagatcttccaatgattatgccagctgaa
cgcttacctgtgtatcagatacctgcgaagagcggagcggaggacatacatccgggtgac
gaccgaaacgagattaccccgcaggataaagtgctgctgattattgaggatgatattaat
tttgcgaatattttgtacgacatggcccgtagtcggggctttaaggcgttgattgctctc
aaaggagacgatgggctgaacatggctcattcctatttgcccgacgctattatattagat
attcagttacctgtgatggatggctggtccattttgggcgagctgaaaggcaattcgtcg
acacgccatattccagtacatgttatctcagtcatagatgatgtgaagcagggcttgatg
atgggcgcaattgcttatctcaaaaagccttcctcgaaggagagtctggataaggcattt
tcacatataaagtcgtatacggaccaaatggtaaaacgcctccttgtagtcgaggatgac
gataatcaacgcaaatccattattgagctcatcgaccatgatgatgtggccattacagcg
gtatcgactggtaaagaagcactaaacgagctggccacccagcggtatgactgcatggta
ctggacctgatgttgagtgacatgacaggctttgaattgctcgaccgcattcgggaaaat
gagcagctcaccgatctgccgatcattatttatacaggcaaagatctggatagtaaggaa
gaaacacaacttcgaaaatatgcagagtccattattattaaggatgtcaaatcaccggaa
cgacttttggatgagactacgttgttcctgcatcgggtggaggcaaatcttcctgaggac
aaacgtaaaattctgcagaagctttataacaaggaagagctgtttgaaggcaaaaaaata
ttgttggtagacgatgatattcgtaatgtatttgctctgtccagtgtgctggaaagctat
cgtatggaggttacctttgctgaaaatggaagggaagcactggaactgctcgaacagaca
cctgattttgatctggtgctgatggatatgatgatgccggaaatggatggatatgaagcg
atgcgacgtatccggttaatgccacaattcgagaagttgcctattattgccctgacagcc
aaggcgatgaaagatgatcgttccaagtgtattgaggcaggcgcttccgattatgtaaaa
aaaccgattcaaaccgaacagcttttatcattaatgcgagtgtggttgtattcgtaa
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