KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_044100
Entry
PPSQR21_044100    CDS       T03178                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) and 5-amino-6-(5-phosphoribosylamino)uracil reductase)
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ppq  Paenibacillus polymyxa SQR-21
Pathway
ppq00740  Riboflavin metabolism
ppq01100  Metabolic pathways
ppq01110  Biosynthesis of secondary metabolites
ppq01240  Biosynthesis of cofactors
ppq02024  Quorum sensing
Module
ppq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PPSQR21_044100 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PPSQR21_044100 (ribD)
Enzymes [BR:ppq01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PPSQR21_044100 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PPSQR21_044100 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AHM68015
LinkDB
Position
complement(4966210..4967310)
AA seq 366 aa
MNTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMA
GEHAQGATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAG
IEVIVGVCEQESIRMNEVFNQYIVSKRPFITIKSAVTLDGKIATRTSESKWITSEAARED
VHRLRHEHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSKLRIPLDARVITDGEAPT
WIFTGRAYDEGKRSQLEQLGIKVYPTQDENSERVNLPQMLDILGAEEVSSVFVEGGAEVN
ASFVQQGLADKLVLYMAPKLVGGRAAPGFLGGEGVSAMSDAVALQDLSVTQVGVDWKIEG
YFGRGK
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaacactcacgaaaaatatatgcgcctggcactggaaaatgccagaagtgccaaaggg
caaacagaaccgaatccgctcgtcggatcagtcattgttaacaatggccgtatcgttggg
atcggcgctcatttgaagcctggtgagccacatgccgagattcatgccttgcgtatggcg
ggggaacacgctcagggagcgacgatctacgtaacgctggagccgtgttctcatcacggc
cggacaggcccatgcgcggaagcgattgtgaaggcaggcattcgccgggtggtgattgca
gccctggacccaaacccgctggtttccggcagaggggtacagattttgaaagatgcgggc
attgaggtcattgtcggcgtatgtgagcaggaatcgatccgcatgaatgaagtgttcaat
caatatatcgtgagcaagcgaccttttattacaatcaaatcggcagtaacgctggacggt
aaaattgcaactcgaacctctgaaagcaagtggatcacatctgaggctgcacgggaggat
gtgcatcgtcttcgtcacgagcatgtaggcatcctggtcggtgtacagactgtgattcat
gataatcctcagcttacgactcgtctaccagaaggacggaatccgattcgtatcattctg
gatagtaagcttcgaattccattggatgctcgtgtcattacagatggagaggcgccgacc
tggatattcacagggcgggcttatgatgaaggcaagcgaagccagctggaacagctcggt
ataaaggtttatccgacacaggatgaaaacagtgagcgggtcaaccttccgcaaatgctg
gacattctgggggcggaggaggtctcgtccgtattcgtggaaggtggggccgaggtgaac
gcttcgttcgtgcagcaaggcctggcagacaagctggtgctgtatatggcgccgaagctg
gttggagggcgcgcagccccgggctttctcgggggagagggcgtgtctgcgatgagcgat
gcagtggccttgcaggatttgagcgtaacacaggttggcgtggactggaaaatagaaggg
tattttgggcgaggaaaatga

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