Paenibacillus polymyxa SQR-21: PPSQR21_044320
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Entry
PPSQR21_044320 CDS
T03178
Symbol
acrB
Name
(GenBank) rnd transporter hydrophobe/amphiphile efflux-1 (hae1) and heavy metal efflux (hme) families, permease
Organism
ppq
Paenibacillus polymyxa SQR-21
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AHM68037
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All DBs
Position
complement(4990806..4993916)
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AA seq
1036 aa
AA seq
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MIKYIVKKQKITLIFFGMCILLGLFNFTSLPKQEQPDVIPMTASVTTIYPGASPERIEQT
ITKIMEQKIKAVQGVKTISSTSSKGQSSIIIEALNDADPTKVWADLRTKVQDAQSELPED
AMQPMINDSMTSSFIGSYAITSDKVEDLYSLNELMNKWKDQLKTVPGISQVNIQGIPEQE
VRVSLDTQKMQQYNLSWEQVVQAIKDENDRVPTGSMDFNERTYQLTVNASTDPSILNNVQ
ISSNDDGFPISLKDIGTASLVFKKAASYTYVNTKPAISISVSGDIGTDVPTVSKATTAKI
NELASSLPKNVHFELLFAQNDRVSEIFGNLTKEMIIAILSVIVICTLGLNLLTSAFVALA
IPVSIAIGFIFLPMTGTTLNQISVIGLIIVLGILVDDAVVVNDNIERRRSEFGENATEAA
IKGTKEVSLSIITATLATVAAFAPLLFLPGNIGDFIKPIPTVISLTMLASMIMSLTIIPI
FRQWYDQRRKGKERNQTVKPPGLLGHQIQSLSNVYSKNWMPRILRRPLLTALVGLMIGTA
AYGLLAVVPIQLFPESDQADATISVTMPEGTSLQATNRVINEIGMWVKKQPETERLSATA
GGGAPQMYSDVAGGHGSGGAVNGQLAVVGKEGLFDLQKTVDSWTHTLQAKYPSALISIRV
PQLGIPVGSAVSIRMKGEDIDKLQNMTAKVKEMVAATPGAVDVTDNMGMQSYNLNFQVNP
QALDKYRVSYSNLTRTLLLMGDGVNVTDFDTGKELLDINIYMNKPNDDPEVLFQQLSVTN
AAKEQIPLSQLVTMKPDFSIQQIHRYDLERTVTISANANGRTATELTNDIRSKLTHTQFE
PGYTWEMGGETSAQSDIFTDLGKLAIIVVFLILLLITMQFYSVSTPLIIMTTVYLAAAGG
ILGSFISGMPIGFMSIMGIISLAGIVVRNGIVLIEFIEDARREGAELTDAILMACSARFR
PILLTSLTAIVGMIPIATIGEILFKPLATTIIFGLIFSTILTLFVVPTLYMVVAHLKLKR
KQKQEKSINTDSSLTM
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatatattgttaaaaagcagaaaattacgcttattttctttggcatgtgcata
ctgctagggctcttcaattttacatcattacccaaacaggagcagcctgatgttattcct
atgacagctagtgttacaacgatctatccgggtgcctcacctgaaagaatcgagcaaacc
attactaagatcatggaacagaaaattaaagctgtacaaggtgtcaaaacgatttcctct
acttcatcgaaaggccaatccagtatcatcatagaagctttgaatgatgcggacccgacc
aaagtatgggctgatcttcgtacaaaggtgcaggatgcacaatctgagcttccagaggac
gcgatgcagcctatgatcaatgatagcatgactagctctttcattggttcatatgcgatt
acttctgataaggttgaggatttatattcgttaaatgaattaatgaacaaatggaaagat
caattaaaaacagtccctggtatttcgcaggtcaatattcaagggatacccgagcaagag
gtacgagttagtttagacacgcaaaagatgcaacaatataacctctcctgggagcaggtt
gtccaagcgatcaaggatgagaatgatagagtacctacaggaagtatggatttcaatgag
cgtacttatcagctgacggtaaatgcctcaacggacccatcgattctgaataatgtccag
atttcaagcaatgacgatggatttccgatatctttgaaggatataggtactgcctcgctt
gtttttaaaaaagcagctagttatacgtatgtgaataccaagcctgctatttcgatcagt
gtgagtggagatataggcacagacgtgcctacagtttccaaggcaacaacagctaaaatc
aatgaacttgcgagcagtttgccgaagaatgtacattttgaactgctttttgcacaaaat
gatcgagtgagtgaaatatttggaaatctgaccaaagagatgattattgctattttatcg
gtcattgtgatatgtactttaggtttgaatttgctaacttctgcatttgtagcgttggcc
attcctgtttccatcgccatcggctttattttcttgcccatgacaggaactacgctgaat
caaatatcagtcatcggactcatcatcgtgctagggatattggttgatgatgcggtcgtg
gtcaatgacaacattgaacgccgacgctctgaatttggggaaaatgctacggaggcagcc
attaaaggaaccaaagaggtgtccttatcgatcattacagctacgctagctacggttgca
gcatttgccccgctgctatttctgccgggtaatatcggagactttattaaaccgatccct
accgttatttcgttaaccatgctggcttccatgattatgtcgctaacgattattcctatt
ttccgccaatggtatgatcaacgtcgtaaaggaaaagagaggaaccaaaccgttaagcca
cctgggcttctggggcatcaaatccagtctctatccaatgtgtactctaaaaactggatg
ccaagaatactacggcgtccacttttaacagcgctggttggtcttatgattggtacagcc
gcttatggactacttgcggttgttcccattcaactattcccagaatccgatcaagcagat
gccaccatcagcgtaacgatgccagaaggaacgtcgttgcaggcaaccaatcgggttatt
aacgagattggcatgtgggtcaaaaaacaaccagaaacagaacggttgtcggcaacggca
ggtggaggagcgcctcagatgtatagcgatgttgcaggcggtcacggctccgggggagcg
gtcaacggtcaacttgctgtcgttggaaaagaggggctattcgatctccaaaaaacagtg
gatagctggactcatacgcttcaagccaaatatccatctgcattgatcagcattcgggtt
cctcaattaggtatcccggtcggcagtgcggtgtctatccgtatgaagggagaagacatt
gataaactgcaaaacatgacagctaaagtcaaagaaatggttgcggcgacccccggagct
gtagatgtgaccgataatatgggaatgcaaagctataatctgaatttccaagtcaatcca
caagcattggataaatatcgggttagctattccaatttgacacgtacgctgctgttaatg
ggtgacggagttaatgtaacggattttgatacaggtaaggaactactggatatcaatata
tacatgaataaaccaaacgatgatcctgaggtattgttccagcaattaagtgtaaccaat
gcggcaaaagagcaaattcccttatcccagttagtcacgatgaaaccggacttttccatt
cagcaaatccaccgctatgatttggagcggacagtaacgatctcagccaatgcaaatggg
cgtacggctacagaactcactaatgacatccgtagcaaactaacccatacacagtttgaa
ccaggctatacctgggagatgggcggagaaacatccgcgcaatctgatatttttacagat
ctgggcaagttagctattattgttgtatttctcatcctgctcttgatcacgatgcagttt
tactccgtctccacaccgctcattattatgaccactgtgtatctggcagcggcaggtgga
attcttggaagctttatttcaggcatgccaattggattcatgagtattatgggtatcatt
tcactggccggtatcgtcgtgcgcaacggtattgtgttgatagagtttattgaagatgcg
cggcgtgaaggagccgaactgacagacgcaattcttatggcatgttctgcccgtttccgt
ccgatcttgcttacttcgctaactgcgattgtgggtatgatccctattgccacaataggg
gaaatcctcttcaaaccgttggcaacgaccattatttttggactgatcttttcgaccatt
ttaaccttgtttgttgtaccgactctgtatatggtcgtagctcatctgaagctgaagcgg
aagcagaagcaggaaaagtctataaataccgatagctcattgaccatgtag
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