Paenibacillus polymyxa SQR-21: PPSQR21_045060
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Entry
PPSQR21_045060 CDS
T03178
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase a
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_045060 (truA)
Enzymes [BR:
ppq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PPSQR21_045060 (truA)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPSQR21_045060 (truA)
Prokaryotic type
PPSQR21_045060 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AHM68094
LinkDB
All DBs
Position
complement(5095268..5096038)
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AA seq
256 aa
AA seq
DB search
MKVNYDGTHYDGFQTQPSGNTIQDCLENAIYSLTGERLKITGSGRTDAGVHAYGQVFNFH
TESPIPIHRWCLALNAWLPRDIIVTDAREVPLSFHARRMAKRKTYRYSINANRFPDIFHR
RTQAHHPTSLDVRAMEKGLAHLVGTFDYTSFASRRSQKTNHVRTIYEAYITVDHSFSRPG
SDDQGIIHTYITGSGFLQHMVRIIMGTLLEVGEGKKSPDDIPSILEAKNRSKAGPTAVGH
ALTLWNVEYEENIKKH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaactatgatggaacccactatgatggctttcagacacagcctagtggcaac
accattcaggactgtcttgaaaatgctatatactcattgacgggcgaacgtcttaaaatt
acgggctcaggacgtacagatgcaggtgtgcatgcatacgggcaggtattcaattttcat
actgaatcgccgattccgatacatcgctggtgtctggcacttaatgcctggctgcctcgt
gatatcatcgttacagatgcgagagaggtgccactgtcctttcatgcacgccgcatggcg
aagcggaagacgtatcggtacagtattaatgcgaaccggtttccagacatctttcaccgt
cgtacacaggcccatcatccaacgagtctggatgtaagagcgatggaaaaggggttggct
catttagtgggcacctttgactatacttcgttcgcatctcgacgttcccaaaagacgaat
catgttcgcactatttacgaagcctatataacggtagaccattccttttcacgtccaggg
tcggacgatcagggaattattcatacttatattacaggtagcggatttttgcagcacatg
gttcggattataatggggactttgctggaagtgggagaaggcaaaaaatcgccggatgat
attccttccattttggaagcaaaaaaccgttcaaaggctggccctacagccgttggacac
gctttaacgctctggaatgtagagtacgaagaaaacatcaaaaaacattga
DBGET
integrated database retrieval system
