Paenibacillus polymyxa SQR-21: PPSQR21_045560
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Entry
PPSQR21_045560 CDS
T03178
Symbol
cysS
Name
(GenBank) translation initiation factor if-1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PPSQR21_045560 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppq01007
]
PPSQR21_045560 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_045560 (cysS)
Enzymes [BR:
ppq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
PPSQR21_045560 (cysS)
Amino acid related enzymes [BR:
ppq01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PPSQR21_045560 (cysS)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PPSQR21_045560 (cysS)
Prokaryotic type
PPSQR21_045560 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
CysS_C
tRNA-synt_1f
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AHM68144
LinkDB
All DBs
Position
complement(5131339..5132742)
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AA seq
467 aa
AA seq
DB search
MSLQIYNTMTRSREPFVPLEPGRVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY
DVNYVVNFTDVDDKLIRKARELNMEVPAVAEKFIAAYHEDLTGLNVPAASINPRVTESMD
LIIDFIKDLVDKGYAYENDGDVFYRTKMFKDYGQLSGQNLEELQFGIRINVDERKENAED
FVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPHHECECA
QSEVITGKPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHKPEALRYFMLSTHYRN
PLNYNQETMSQAENSVERIANAVANVKHRLSMALKGNEAVSAELQMKLDGILQQFGEKMD
DDFNTPDAITAVFEWVSEANLLLQRDVVNQAELQAVLHTFHSMNTVLRIYSEPSEELLDD
EIEQLIAERVEARKTKNWGRADEIRDLLATKGIVLEDTAQGMRWRRK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcaaatttataatacaatgacgaggagccgggagccttttgtgccactggag
cctggaagggttaaaatgtatgtatgtggtcctacagtgtatgattacattcatattggt
aatgcacgacctgtaattgtgttcgacgtggtacgcagctacttggagtatttgggctat
gatgtaaactatgtggtgaattttacggacgttgatgataagttgatccgcaaagctcgg
gaacttaatatggaggttccggcagttgccgagaagtttattgctgcctatcatgaggat
ctgacaggattgaatgttcctgctgccagcataaatcctcgtgtaaccgaaagcatggat
ctgattattgattttatcaaggacctggtagacaaaggctatgcctacgaaaatgatggt
gatgtcttctaccggaccaaaatgtttaaagactacggacagctgtcaggccaaaatttg
gaggaactccagtttgggattcgcatcaatgtggatgaacgcaaggagaatgccgaggat
tttgtactctggaaagcagcgaaaccgggagaaatttactggtcaagtccttggggggat
ggacgcccaggctggcatatcgaatgctctgctatggctcgtcactatttgggggataca
ctggatattcacggaggcggacaggatctgcaatttccgcatcatgaatgtgaatgcgca
caatccgaagtgattacgggtaaaccattatctcgctactggatgcataacggatatatt
cgcatagataatgaaaaaatgtcgaaatcactcggtaacggtattttggttaaagatctg
cgtgctcgtcacaagcccgaagctttacgttattttatgctgtcgacacattaccgcaac
cctttgaactacaaccaagagacgatgagtcaggcggagaatagtgtcgaacggattgcc
aatgcagtcgccaatgtaaagcatcgtttatccatggctttgaaaggtaatgaagcagta
tcggctgagctgcaaatgaagcttgatgggatattacagcaatttggcgaaaaaatggat
gatgatttcaatacgcctgatgcgattactgcggtgttcgaatgggtcagcgaagccaat
cttttgttgcagcgtgatgttgtcaatcaggcggaattgcaagcggtgctgcataccttc
cattcgatgaatacggtacttcgcatttattcggaaccgagtgaagaactgctggatgac
gaaattgagcagttaattgcagaacgtgtcgaagctcgtaaaactaaaaactggggtaga
gctgacgaaattcgtgatctgttagctactaaaggcattgtgcttgaagatacggcgcag
ggtatgcggtggcggcggaaatga
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