Paenibacillus polymyxa SQR-21: PPSQR21_045640
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Entry
PPSQR21_045640 CDS
T03178
Symbol
sms
Name
(GenBank) DNA repair protein rada
KO
K04485
DNA repair protein RadA/Sms
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppq03400
]
PPSQR21_045640 (sms)
DNA repair and recombination proteins [BR:
ppq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PPSQR21_045640 (sms)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_16
NTPase_1
DUF7125
KdpD
nSTAND3
AAA_24
AAA_14
ADH_zinc_N
AAA
ATPase_2
NPHP3_N
HypA
SLFN-g3_helicase
AAA_5
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHM68152
LinkDB
All DBs
Position
complement(5139837..5141210)
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AA seq
457 aa
AA seq
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MAKVKTKFSCTECGYESPKWYGKCPGCQAWNSMVEETESVVKTQGMGSSLLTHSTKDKPL
PIIEVESGKETRILTGIGELNRVLGGGVVPGSLVLVGGDPGIGKSTLMLQTSNELALTGL
KVLYVSGEESVRQTKLRADRLGALSPSLYVLCETNLETIEEAVDSLKPEFLVIDSIQTVY
LPEVTSAPGSVAQVRECTSRFMRIAKGLGIATVLVGHVTKEGAIAGPRLLEHMVDCVLYF
EGERHHTYRLLRAVKNRFGSTNEIGIFEMAESGLREVANPSELFLSERPLGVAGSTVVAS
MEGTRPVLVELQALIAATHFPSPRRMGTGIDHHRMGLIIAVLEKRMGMFLQNQDAYLNVA
GGVKLDEPAVDLAIAVSIASSFRDAPTKPYDVIFGEVGLTGEVRAVSRAEQRVREAEKLG
FKRVIMPEKSLKGWTHPKGIQIIGVGTVADALAAALD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtgaaaactaaattttcctgtacagaatgtggctatgaatcgcctaaatgg
tacggaaaatgtcctggatgccaggcatggaattccatggtcgaagaaacggaaagcgtt
gtaaaaactcaaggaatgggatcttcccttcttactcatagcacaaaagacaaaccgctt
cctattattgaagtggagagtggcaaagaaacacgaattttgacgggaattggtgaatta
aatcgtgtactcggtggaggtgtggtgccaggttcacttgttctggtgggtggtgacccg
gggatcggtaagtctacgcttatgctgcaaacctctaatgagctggctttaactggttta
aaggtactctacgtgtctggtgaggaatccgtccgccaaacgaagctacgtgcagatcgc
ctcggtgctttgtctcccagtctgtacgtattatgtgagacgaatttggagacgattgaa
gaagcagtggacagcttgaagccggagtttttggtcatcgactcgatacagactgtatat
ttgcctgaggtgacaagtgcgcctggtagtgtagctcaggtgcgcgagtgtacttcacga
tttatgcggattgccaagggattaggtattgctacagtactggtagggcatgtgaccaaa
gaaggcgctattgcaggtccgcgtttgttggagcatatggtcgattgtgtactttatttt
gaaggagagcgccatcatacgtatcggctgttgcgtgcggttaagaatcgtttcggttct
acgaatgaaattggtatttttgaaatggccgaaagtggtttgcgtgaggtggcgaatcct
tctgagctcttcctgtccgaacggccactgggggtggctggttccacagtcgttgccagt
atggagggaacccggcctgtgttggttgaattgcaagcactcattgcggctacgcatttt
ccatctccacgccgaatgggtacggggattgaccatcatcggatgggattaatcattgcc
gtactagaaaagcggatgggcatgtttttgcaaaaccaggacgcttatctcaatgttgct
ggaggcgtaaagctggatgaaccagcggtggatttagccatagcggtgagcattgcttcc
agctttagggatgctcctaccaagccgtacgatgtgatttttggtgaagtaggactgaca
ggcgaggtgcgggctgtatcccgagcagaacagcgagtgcgagaagcagagaaattaggt
ttcaaacgggtgatcatgcccgagaaaagcttgaagggctggacacatccaaaagggata
caaattatcggagttggaacggtggcagatgcactggcagccgcattagattag
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