Paenibacillus polymyxa SQR-21: PPSQR21_045750
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Entry
PPSQR21_045750 CDS
T03178
Name
(GenBank) ATP-dependent DNA helicase pcra
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq03420
Nucleotide excision repair
ppq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPSQR21_045750
03430 Mismatch repair
PPSQR21_045750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppq03400
]
PPSQR21_045750
Enzymes [BR:
ppq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPSQR21_045750
DNA repair and recombination proteins [BR:
ppq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPSQR21_045750
MMR (mismatch excision repair)
Other MMR factors
PPSQR21_045750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHM68159
LinkDB
All DBs
Position
complement(5155468..5157792)
Genome browser
AA seq
774 aa
AA seq
DB search
MQSIDIHEAVARLNQPQRQAVEAVDGPLLIMAGAGSGKTRVLTHRIAYLIATRKTAPWGI
LAITFTNKAAREMQDRVSKLIGPQGKDVWVSTFHSMCVRILRRDIERIGFTSNFSILDST
DQLSVIRSCMKDLNIDTKKFEPKAVQSMMSTAKNELVTPEMYERKIGDYFEGIVAKVYTK
YQQRLRNNNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCKML
ADKHHRLCVVGDSDQSIYRWRGADISNILNFEEDYPEARTILLEQNYRSTSNILNAANEV
IGQNTGRKPKKLWTDKEGGAKIKVYRADSEHDEGYFIASEIHKNIKAGKTYSHHAILYRT
NAQSRVVEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLIRIINVPKR
SIGDTTVGKLQAAAAERGISIFRVLQVVDDLGFAGRTRNALVEFYDMIEGLSRMVDYLSV
TELTEKMLETTQYRLELQNENTLESRSRLENIDEFLSVTMEFEKGTEDKSLVSFLTDLAL
IADIDSMNDDEEEQSDAVVLMTMHSAKGLEFPIVFIVGMEEGVFPHSRAFLDNEELEEER
RLAYVGITRAEEQLFLTCAQMRTLFGRTTANPPSRFLEEIPDELKEDTVIKRDRYRRSGN
VGGSYGGRGLGKSSGSNFGGERSFDTMSRSGSSASASPRVTVTTSSPAKPTPSVATGGAS
IFAAGDKVQHGKWGIGTIVAVKGTGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaatagatatacatgaggcggtagctcgccttaatcagcctcagcgtcaggcc
gtggaggcggtagatggtcctctgctaattatggctggcgcaggcagtggtaagacacgg
gtgctcacgcaccgaatagcttatctcattgcgacccgcaagacggctccatgggggatt
ttggcgattacctttacgaacaaggccgcgcgtgaaatgcaggatcgcgtatccaagctg
attggtccgcaggggaaagatgtgtgggtatccacctttcactccatgtgtgtgcgtatt
ttacgccgggatatcgagcggatcggatttacctccaatttcagcatcttggattctacg
gatcaattgtctgtcatccgaagctgtatgaaggacctgaatatagataccaaaaagttt
gaacccaaagcggttcagtctatgatgagtacggctaaaaatgaactggtcactcccgaa
atgtatgagcgcaagattggcgattattttgaaggaattgtggcgaaggtatataccaag
taccaacaacggctcagaaacaacaactctcttgattttgatgatttgattatggcaacg
attcagctctttaaagaagtgcccgaggtacttgatttctaccagaagaaatttcaatac
attcatgttgatgaatatcaggatacgaaccgtgcgcagtatatgctgtgcaaaatgctg
gctgacaagcatcatcggctatgtgttgtaggtgacagcgaccaatccatctatcggtgg
cggggtgcggatattagcaacattttgaactttgaagaggattacccggaagcacgcacg
attttgctggagcagaattatcgctcaacttcaaatattcttaatgcagctaacgaagtc
attggccaaaacacaggccgcaagccaaaaaaactatggaccgacaaagaaggcggcgcc
aagattaaggtttatcgtgctgactccgagcatgacgaaggctattttatcgcctcagaa
attcataagaatattaaggcgggcaaaacctatagccatcatgccattttgtaccgtacg
aatgcccagtctcgggtggtcgaggaaattttgatcaaatcggatattccttaccaaatc
gtgggcggaatcaagttctatgatcgtaaagagattaaggatttgctggcgtatcttcgc
ctactgtccaatcctgacgacgatatcagcctgatccgaatcattaatgtacccaaacga
agcatcggcgacacaacggttggcaaattacaggcagccgcggcggaacgtgggatttcg
attttccgtgtgcttcaagtggttgatgatttgggctttgctggacgcacgcgcaatgcg
cttgtagagttttacgatatgattgaaggtttaagtcggatggtggattacctgtcagtt
actgagttgaccgaaaaaatgctggaaaccacccaatatcgattggaactacaaaacgag
aatacactcgagtcacgctcgcgtttggagaatattgatgagtttctgtcggtaactatg
gaatttgaaaaagggacggaagacaagtcgcttgtctccttcctgaccgatcttgctctc
attgccgatattgattccatgaatgacgatgaagaggagcagagtgatgcggttgtatta
atgaccatgcatagcgccaaaggactggagtttcctatcgtatttatcgttggtatggag
gaaggggtattccctcacagcagggcctttttggataatgaagagctggaggaagagcgt
agattggcgtatgtcgggattacccgtgctgaggagcagttgttcctcacatgcgctcag
atgcgcactctgtttggacgtaccacagctaacccgccttcccgctttctcgaagagatt
ccggatgagttaaaagaggatacggtcatcaagcgtgatcgttaccgtcgttcaggcaat
gtaggcggatcttatggtggtcgcggactgggcaaaagcagtggcagcaactttggtgga
gagcgctcgtttgatacgatgagccgtagtggctcgtctgcttccgcgtcgccccgcgta
acagtgaccacttcctcacctgcaaaaccaactccgtctgttgcgacagggggggcatcc
atttttgctgccggagacaaggtacagcatggcaagtggggaattggaaccattgtagct
gtaaaaggaacgggcaatgatatggagcttcagattgctttcccggctccagtaggggtt
aaacgactgttagctggctttgcaccgattacaaaagtagaataa
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