Paenibacillus polymyxa SQR-21: PPSQR21_045830
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Entry
PPSQR21_045830 CDS
T03178
Symbol
rfbC
Name
(GenBank) glucose-1-phosphate thymidylyltransferase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00521
Streptomycin biosynthesis
ppq00523
Polyketide sugar unit biosynthesis
ppq00541
Biosynthesis of various nucleotide sugars
ppq01100
Metabolic pathways
ppq01110
Biosynthesis of secondary metabolites
ppq01250
Biosynthesis of nucleotide sugars
Module
ppq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PPSQR21_045830 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PPSQR21_045830 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PPSQR21_045830 (rfbC)
Enzymes [BR:
ppq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PPSQR21_045830 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AHM68167
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All DBs
Position
complement(5165709..5166254)
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AA seq
181 aa
AA seq
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MIIKEVLAGAKIIEPVVHGDHRGFFMESYNEQIMKQHGINYAFIQDNQSLSAEAGVIRGL
HYQLHPKAQTKLIRVLSGAIYDVIVDIRKSSPTFGQWVGVILSEHNRRQLLVPKGFAHGF
CTLVPNTQVLYKVDEYYSPENDRGILWNDPALGIDWPTSHAILSEKDQKHPTLRDADINF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgataataaaggaagtacttgcaggtgcaaaaattattgaacccgtggtccatggtgat
caccgtggtttttttatggaaagctacaatgaacaaatcatgaagcagcatggaatcaac
tatgcttttattcaggataatcagtccttatctgcagaagctggcgtgatccgagggctg
cattaccagcttcatcctaaagcccagaccaaacttatccgagtgctttctggagccatc
tatgatgttattgtggatattcgtaaaagttccccaacattcggtcaatgggtcggggtg
atcttaagcgagcataatagacgtcagttactggtgcctaaagggttcgctcatgggttc
tgtacgcttgttccaaatactcaagtgctgtataaggtagacgagtattactcacccgaa
aatgatcggggaattctgtggaatgatcctgcgctggggattgattggccaacttctcat
gctattctttcagagaaggatcagaagcatccgacattaagggatgcagacattaacttt
gattag
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