Paenibacillus polymyxa SQR-21: PPSQR21_046960
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Entry
PPSQR21_046960 CDS
T03178
Name
(GenBank) sporulation transcriptional regulator spoiiid
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppq03000
]
PPSQR21_046960
Transcription factors [BR:
ppq03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
PPSQR21_046960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_11
HTH_50
HTH_7
HTH_10
HTH_23
HTH_38
HTH_22
HTH_IclR
HTH_DeoR
HTH_Tnp_ISL3
HTH_36
LacI
TetR_N
MarR_2
GntR
Mga
LysM3_LYK4_5
HTH_Tnp_4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AHM68280
LinkDB
All DBs
Position
complement(5330044..5330331)
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AA seq
95 aa
AA seq
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MHDYIKERTIKIGRCIVETRNTVRTIAKEFGVSKSTVHKDLTERLPEINPDLADQVKHIL
EYHKSIRHLRGGEATKIKYKKTSGKRRGILVSGKS
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgattacatcaaggaacggaccatcaaaatcggtcgctgtatcgtggaaacaagg
aatacggtccgtacgattgccaaggaatttggtgtctccaagagcacggtgcataaagat
ctgaccgaacggctgcctgaaattaacccggatcttgccgatcaggtgaagcacattctc
gaataccataaatccatccgccatctgcgggggggggaagcgacgaaaattaaatacaaa
aaaacgagtgggaaaagaaggggaattcttgtttctggcaagtcctaa
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