Paenibacillus polymyxa SQR-21: PPSQR21_048400
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Entry
PPSQR21_048400 CDS
T03178
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSQR21_048400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_048400
Transporters [BR:
ppq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PPSQR21_048400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AHM68424
LinkDB
All DBs
Position
complement(5472696..5473769)
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AA seq
357 aa
AA seq
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MKKWFKGFMAVTLASVVLAGCGSNATGGQADGKDGSADGKKKLVISTWGFSEDFFNKEVY
APFEKEHNVDIVVEIGNNAERLNKISQGSTDVDLIYLSDYYAQQGIQQGLFEKLDRSKVP
NLNQIYDIAKAPLGEEYGPAYTVGRLGIAYNPELVKKDVTSWADLWGTEFKGNVTLPNIT
ATAGPMMVDAASKVAGSKEFNEDQAFGKLKELSPNIVKFYSKTSEFVNMFSQQEIAGGPI
MEMYFKDLQAAVPGAKFVAPNEGAYAVMNTVNVVKGSDQKELAEEFINWQLSKEVQEKSA
KAKVDSPVNTQVVLSGADTEGITYGADVVNKLTKLDMKFVNDHIKAWTDRWNREVAQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtggtttaaaggatttatggctgtgaccttggcatctgtggtactggcaggt
tgcggcagcaatgctactggtggtcaggcagatggaaaagatggctcagctgatggaaaa
aagaaactagttatttccacatggggcttctccgaggacttctttaataaagaagtgtac
gcgccttttgaaaaggagcataacgttgatattgttgtagaaatcgggaataatgcggag
cgattgaacaaaatcagtcaaggcagcacggatgtcgatctgatttatctgtctgattat
tatgcccaacaggggattcaacaagggctgttcgagaagttggatcgcagtaaagtgccg
aacttgaaccaaatttatgatattgccaaagcaccgctgggtgaggaatatggacctgct
tatacagttggacgcctcggtattgcctataatccggagctggtgaaaaaagatgtgacc
tcctgggctgatctgtggggcactgaattcaaaggaaacgtgactctgccgaatattacg
gcaacggctggaccgatgatggtggatgcggcctccaaggtagcgggtagcaaggaattt
aatgaagaccaagcctttgggaaactgaaagagctgagtccgaatattgttaagttttat
agtaaaacgtctgagttcgtaaacatgtttagccagcaggaaattgcgggcggtccgatt
atggaaatgtacttcaaagatttgcaggcagctgtgccaggggcgaaatttgtggctcct
aacgagggtgcctacgcagtaatgaacacagttaatgtagtaaaagggtctgaccagaag
gagctggctgaggagttcatcaactggcagctgagcaaggaagttcaagaaaaatctgcc
aaagcaaaggttgattctccggtgaatacacaggtggtactgtctggtgcggatacagag
ggaattacgtacggtgcagatgtagtgaataagctgaccaagctggatatgaaattcgtt
aacgatcatatcaaggcatggacagatcgctggaaccgggaagttgcacaataa
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