Paenibacillus polymyxa SQR-21: PPSQR21_051040
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Entry
PPSQR21_051040 CDS
T03178
Name
(GenBank) arabinose metabolism transcriptional repressor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppq03000
]
PPSQR21_051040
Transcription factors [BR:
ppq03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PPSQR21_051040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
GntR
HTH_11
HTH_DeoR
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AHM68688
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All DBs
Position
5761789..5762877
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AA seq
362 aa
AA seq
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MKPKYQVILEDIKSNILSGAYSVGEQIPTEFALQDKYKVSRQTVRKAILELSNEGFLRSE
KGSGTYVSNQFRSKTGGNSSNKTIGVITTYISDYIFPSIIRGIEARLNEDNYSLLLASTN
NDVAQEKKALEMMLSFGVDGLIIEPTKSNLYNPNIAYYLTFKEQDVPFIMINAYYEELEV
PYFCLDDVQSSYLATKELIANGHTQIGIIAKMDDLQGKYRMKGYIKALGEAKLRFHPEQV
LSFYTETKQDLSTNLKKFLTEQRDDLTAIVCYNDEVGLEVVHVCRQLGISVPEDLSIIGQ
DNSYISKNANIKLTTLTHPQEQMGRDAADWVIKKLQGKKDLSNQTYYQPVLIEGETVKKK
LK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaaagtatcaggtcatccttgaggatataaaaagcaacattctttcaggggca
tacagcgtaggagaacaaatcccaacggaattcgctttgcaggataagtataaagttagt
cgccagacggtccgaaaggctattttggaactatctaacgaaggttttttaagaagtgaa
aaaggatctggcacctatgtcagcaaccaatttcggtcaaaaaccggtggcaattccagc
aataaaaccatcggagtcatcacaacctacatctctgattacatctttccctctattatt
cgcgggattgaagccagattgaacgaagataattattcattactattagccagtaccaat
aatgatgtcgcacaggaaaagaaagctttggagatgatgctgtcctttggtgtcgatggt
ttgatcattgagcctacgaagagcaatctatataatcccaatatcgcttactatctgacg
ttcaaggaacaggatgttccattcatcatgattaatgcctattatgaagagttggaggtt
ccttacttctgtctcgatgacgtacaatccagctatctggcaaccaaagaattgatcgct
aacggacacacacagattggcatcattgccaaaatggacgatttacaggggaagtatcga
atgaagggttatatcaaagcgcttggagaagccaaattacgctttcaccccgagcaagtg
ctctcattctatacagaaacgaagcaggatctgtccaccaatttgaagaaattcttgacc
gaacaaagagacgatttaaccgcaattgtctgctataacgacgaggtcggactagaagtt
gtacatgtatgcagacaacttggtatatccgttcccgaagatttgtccattattggccaa
gacaattcctatatttccaaaaatgcaaacatcaaactaacaacattgacacacccacag
gaacaaatgggccgtgatgccgccgactgggttattaagaaactacaagggaagaaggat
ctaagcaaccaaacctattatcagcccgtgttaattgaaggagagacggtaaagaagaaa
ttgaagtga
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