Paenibacillus polymyxa SQR-21: PPSQR21_051700
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Entry
PPSQR21_051700 CDS
T03178
Symbol
thdF
Name
(GenBank) tRNA modification GTPase mnme
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_051700 (thdF)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PPSQR21_051700 (thdF)
Prokaryotic type
Methyltransferases
PPSQR21_051700 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
GTP_EFTU
AIG1
ABC_tran
Ras
Roc
Arf
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHM68752
LinkDB
All DBs
Position
complement(5823424..5824800)
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AA seq
458 aa
AA seq
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MLSDTIAAIATAVGEGGIAVVRVSGPEAVTEVEALFRSKTPLSKAPTHTVHYGHIIDPQS
QEKVEEVLVTVMRAPRSFTTEDVVEISTHGGVVAVKRVMDLLLLQNIRLAEPGEFTKRAF
LNGRIDLSQAEGVIDLIRSKSDKAFSMALKQVDGQLSQNIRRLRHVLVETLAHIEVNIDY
PEHDVESFTSELIKDKSSQVIAEIDRLLHTAEQGKILREGLTTAIVGRPNVGKSSLLNTL
AQGERAIVTDIPGTTRDVIEEYVTINNIPLKLLDTAGIRETMDVVERIGVERSRTAVSEA
DLLLIVMNANEPLHEDEMALMEQIRGRQAIVIMNKMDLPAQIDRDLLLRYVPEELIVPMS
VKENEGADRLEQAISNLFFSGKLESADMTYVSNVRHIALLKKARQSLVDAYEAADQFVPI
DMIQIDVRLAWEHLGEIVGDTAHDALIDQIFSQFCLGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgataccatagctgccattgcaacggctgtcggcgagggcggcattgcagtt
gtgcgggtcagcggtccagaagcggtcacggaagtggaggctttgttccgtagtaaaacg
cccttaagtaaggctccaacgcacacggtacactatggacatattatagatcctcaaagc
caagagaaggtggaggaagttttagttacagtgatgcgggcaccacgctcttttacaaca
gaagatgtggtagagatcagcactcatggcggggtggtagccgttaaacgggtgatggat
ttgttactactgcaaaatatacgtctggctgagccaggtgaatttacgaaacgcgctttt
ttgaatggtcgtattgacctgagtcaagcggagggcgttattgacttaattcgttccaaa
tcggataaagccttttcgatggctctgaagcaggtggatgggcagctgtcccagaatatt
cgtcgtttgcgtcatgttttggtcgagacacttgctcatattgaagtaaacattgattac
cctgagcatgatgtagaatcctttacgtctgagttaatcaaggataaaagcagccaggtt
atagcggaaattgatcggctgctgcatacagcggagcaggggaaaattttgcgtgaaggg
ctgactacagcgattgtcggaaggccgaatgtaggcaaatcgtcgctgcttaacacgttg
gctcagggcgaacgggcgattgtgaccgatattccgggtaccacccgtgacgttatcgag
gagtatgtgacgattaataatattccgctcaagctgttggatacggctggaattcgcgaa
acgatggacgttgtggaacggattggggtagagcgttcgagaacggcagttagtgaagcg
gatctgttgctcatcgttatgaatgccaacgaaccactgcacgaggatgaaatggcatta
atggaacaaatccgcggtagacaagcgattgttattatgaataaaatggacttaccggcc
caaatagaccgggatttgttgctgcgctatgttcctgaagagcttattgtgccgatgtct
gtgaaggaaaatgagggagcagatcggctggagcaggctatatcgaatttattctttagc
ggcaagctagaatcagcggatatgacgtatgtcagcaatgtacggcatattgctttgctg
aagaaagcgcgccaatcgctggtagatgcctatgaggccgctgatcaatttgttccaatt
gacatgatccagattgatgtaaggctggcgtgggagcatttgggtgagattgtaggcgat
actgcgcatgatgcgttaatagatcaaatattttcacaattctgtctgggcaagtag
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