Photobacterium profundum: PBPRA0064
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Entry
PBPRA0064 CDS
T00173
Symbol
C4793
Name
(GenBank) Putative fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00071
Fatty acid degradation
ppr00280
Valine, leucine and isoleucine degradation
ppr00310
Lysine degradation
ppr00362
Benzoate degradation
ppr00380
Tryptophan metabolism
ppr00410
beta-Alanine metabolism
ppr00640
Propanoate metabolism
ppr00650
Butanoate metabolism
ppr00907
Pinene, camphor and geraniol degradation
ppr00930
Caprolactam degradation
ppr01100
Metabolic pathways
ppr01110
Biosynthesis of secondary metabolites
ppr01120
Microbial metabolism in diverse environments
ppr01200
Carbon metabolism
ppr01212
Fatty acid metabolism
Module
ppr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PBPRA0064 (C4793)
00650 Butanoate metabolism
PBPRA0064 (C4793)
09103 Lipid metabolism
00071 Fatty acid degradation
PBPRA0064 (C4793)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PBPRA0064 (C4793)
00310 Lysine degradation
PBPRA0064 (C4793)
00380 Tryptophan metabolism
PBPRA0064 (C4793)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PBPRA0064 (C4793)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PBPRA0064 (C4793)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PBPRA0064 (C4793)
00930 Caprolactam degradation
PBPRA0064 (C4793)
Enzymes [BR:
ppr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PBPRA0064 (C4793)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PBPRA0064 (C4793)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PBPRA0064 (C4793)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PBPRA0064 (C4793)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CAG18519
UniProt:
Q6LW06
LinkDB
All DBs
Position
1:complement(63779..65941)
Genome browser
AA seq
720 aa
AA seq
DB search
MIYQGETLSVRYLDDGIAELNLNAPGAVNKFDLKTLECLNEALNALYQQSDLKGLLITSD
KDAFIVGADITEFLGLFAKPAEELSQWLTRANDIFNKLEDLPVPTLSAINGHALGGGCEC
VLATDFRLADITARIGLPETRLGIMPGFGGTVRLPRLLGADSAMEIITAGKDKKAQDALK
LGLVDAVVAPTALKDAALSMIKDAIAGKLDWQKRRAQKKAPLTLNKIEATMSFTMAKAMV
AQVAGKHYPAPMTAVIAIEAAARMSRDEALVVENKHFITLAKTDVAQSLVGIFLNDQYIK
GKAKKAAKEGQPTKKGVVLGAGIMGGGIAYQSALKGVPVLMKDIAVPSLDLGMAEAAKLL
NKQLERGRIDGVKMAKVLSGITPSLHYAGAEDADIVVEAVVENPKIKAAVLAEVESNVSD
TTVIASNTSTIPINLLAQSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETISRVVAY
AAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFTQVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPDRMGKNYKDAVDVMFEQQRFGQKNGNGFFAYSVDRRGKP
KKNVDPAVAELLAPVLGAATDFTSDEIIARMMIPMINEVVRCLEECIIATPAEADMALVY
GLGFPPFRGGVFRYIDTLGLAEYVAMADKFAHLGAVYEVPTGLREKAAKGESYYTQQVNA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggcgaaaccctatccgttcgttatctggatgatggcattgcggaactc
aatctcaacgctccaggtgctgtaaataaattcgatctaaaaactctagagtgtcttaat
gaagcattaaacgctctttatcaacaatccgatttaaaaggcttattaattacatctgat
aaagatgcctttattgtcggtgcagatatcacagagtttctcggtttatttgctaaacca
gcagaagagttatcgcaatggctaacccgtgccaacgatattttcaataagctggaagat
ctgcctgtgccaacattgtcggcaattaatgggcatgcactgggtggtggttgtgagtgt
gttctcgcaacagactttcgtttagctgatatcactgcgcgtattggcttaccagaaact
cgccttggaattatgccaggatttggaggaacggttcgtttacctcgccttttaggtgca
gactctgctatggagatcatcactgcaggtaaagacaaaaaagcccaagatgcactaaag
cttggacttgtggatgccgtcgtagcaccaactgctttaaaagatgccgcgttatccatg
ataaaagacgcaattgcaggaaaactcgactggcaaaagcgtcgtgcacaaaagaaagcg
ccattaacactcaataaaattgaagcgacaatgagctttacgatggcaaaagcaatggtg
gctcaagtggcgggaaaacattacccagccccaatgaccgccgttattgcaatagaagcc
gctgcgcgtatgtctcgtgatgaagctctggtcgttgaaaataagcacttcatcacgtta
gccaaaacagatgtcgcccaatcgttagttggtattttccttaatgatcagtacatcaaa
ggcaaagctaaaaaagcagcgaaagaaggccagccaaccaagaaaggggttgtattaggt
gccggtattatgggtggtggtattgcctaccagtcagccttaaaaggtgtacctgtatta
atgaaagacatcgctgtaccgtcgcttgatctaggcatggcggaagcagcaaaattactg
aacaagcaacttgaacgcggtcgaattgatggcgttaagatggctaaagtattatcaggg
attacccctagcctacattacgcaggtgcggaagacgccgatattgtggtagaagcggtt
gttgaaaatccaaaaattaaagccgcggttttagctgaagttgaaagcaatgtatctgat
acaacggttatcgcttctaacacctcaacgatccctattaatttattggcacaatcccta
aagcgtcctgaaaatttctgtggcatgcacttctttaaccccgttcatcgtatgccgctc
gtcgaaattatccgtggtgaacacacttcagaagaaacaatttcacgcgttgtcgcttac
gcagccaaaatgggtaaatcgccgattgttgtcaatgactgcccagggttctttgtaaac
cgtgtgctattcccatactttgccggctttagcttattgttacgcgacggtgctgacttt
acccaagtcgataaagtgatggagaaacaattcggctggccaatgggccccgcttacttg
ctcgacgtggttggtattgataccgcccaccatgcgcaagcagtaatggctgaaggcttc
ccagatcgtatgggtaaaaattacaaagatgctgttgatgtaatgtttgaacaacaacgc
tttggtcagaaaaatgggaacggcttctttgcctactcggtagatcgccgaggtaagccg
aaaaagaatgttgatccagcagtagctgaattacttgcccctgttttaggtgctgcgaca
gactttacgagcgatgaaattattgcgcgtatgatgattccaatgatcaatgaagttgtt
cgttgtttagaagaatgcattatagccacaccagcagaagctgatatggcactggtttat
ggcttaggcttccctcccttccgcggtggtgtattccgctatatcgacacactaggctta
gcggaatatgtcgcaatggcagataagtttgctcaccttggtgccgtttatgaagtacct
actggcttgcgagaaaaagccgcgaaaggtgaaagttactacacacagcaagtaaacgct
taa
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