Photobacterium profundum: PBPRA0106
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Entry
PBPRA0106 CDS
T00173
Symbol
THIC
Name
(GenBank) putative thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppr
Photobacterium profundum
Pathway
ppr00730
Thiamine metabolism
ppr01100
Metabolic pathways
ppr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PBPRA0106 (THIC)
Enzymes [BR:
ppr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PBPRA0106 (THIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CAG18545
UniProt:
Q6LVY0
LinkDB
All DBs
Position
1:106855..108777
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AA seq
640 aa
AA seq
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MSIRKQARLEAKQFIDSLTVQPFPNSQKVYVQGSRADIQVPMREISLADSLVGGSKKAPI
LEPNEPIRVYDTSGFYTDPNQPVNIYDGLEKVRSGWIEERGDTVLLEQSNSVYTKERLSD
ETLDELRFDARIQARQAVEGHCVTQLHYARKGIVTPEMEYIAIRENMGRAKYADEELNQQ
HPGINFGANLPPEITPEFVRKEVAEGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSA
VSSSIEEEVEKLVWSIRWGGDTVMDLSTGRNIHETREWIIRNSPVPIGTVPMYQALEKVN
GVAENLNWDVFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCL
AHHEESFLYMHFREICEICAQYDISLSLGDGLRPGSVADANDEAQFSELRTLGELTKIAW
EYDVQVMIEGPGHVPMHMIKENMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAI
IGWYGCAMLCYVTPKEHLGLPNKDDVKVGLITYKLCAHAADLAKGHPGAQVRDNALSKAR
FEFRWEDQFNLGLDPDTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAKGL
EENGDIAIKLLDNPLEGMQQKSDEFRSRGSELYHPVQEEI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcgcaaacaagcgagattggaagctaaacaatttatagattcactgactgta
caacctttccctaattcacaaaaagtgtacgttcaaggtagtcgagcagacatccaagta
ccgatgcgtgaaatttcattggctgatagcttagtcggtggtagtaaaaaagctcccatt
ttagagccgaatgaaccgatccgtgtttatgatacgtctggcttctatactgatccgaat
caacccgttaatatttatgatggtctagaaaaagtgcgttctggttggattgaagaacgt
ggcgacaccgtattactggagcaatcaaattcggtctataccaaagagcgtttatcggat
gaaacccttgatgagttgcgctttgatgctcgaattcaagcccgccaagcggtagaaggg
cattgtgttactcagctgcattatgcacgcaaaggcattgtgacgccggaaatggaatat
atcgcgatccgtgaaaatatgggtcgtgctaaatatgccgatgaagagctaaaccagcag
catccaggtattaattttggtgccaatctcccccctgaaattacccccgagttcgtgcgc
aaggaagttgccgaaggtcgtgcgattattcctgccaatatcaatcacccagaatcagag
ccaatgatcattggtcgtaatttcttggtaaaagtgaatgccaatattggtaattcagca
gtgagttcttccattgaagaagaggtcgagaaactggtgtggtcgatccgctggggcggc
gataccgtcatggatctttctactggacgcaatattcacgaaacccgcgaatggattatt
cgaaatagcccggtgccgattggtactgtgccaatgtaccaagcattggaaaaggtaaac
ggtgttgccgaaaacctgaattgggatgtcttccgcgatacgcttttagagcaagctgag
caaggggtcgattattttacgatccatgctggtgtattactgcgttatgtaccgatgacc
gccaagcgtgtcactggcatcgtttctcgtggcggctctattatggcgaagtggtgtctg
gctcatcatgaagaaagttttctgtatatgcactttcgcgaaatttgtgagatttgtgcg
cagtacgatatttcactctctctcggtgacggcttacgtccgggatcggtcgcagatgcc
aacgatgaagcacagttcagtgaattacgtacgttaggcgagttgactaaaatcgcgtgg
gaatacgatgttcaagtcatgattgaaggccctggtcatgtgccgatgcacatgattaaa
gaaaacatggatgagcagcttaagcattgccatgaagcgcctttctatacgctaggtccc
ctaacgactgatattgcaccgggttatgatcatataacgtctggtattggtgctgcgata
attggttggtacggctgtgccatgctgtgctacgtcaccccgaaagaacacctcggttta
cccaataaagatgatgtaaaagtcggattgatcacctacaagctatgtgctcatgcggca
gacttagctaaaggtcacccgggtgcgcaagttcgagacaatgcattatcaaaagcccgt
tttgaattccgctgggaagaccaatttaatctcggcttagaccctgatacggcacgtgcc
tatcatgatgaaaccttgccgcaagaatctggaaaagttgcgcatttttgttcgatgtgt
ggacctaaattttgctcgatgaaaatctctcaggaagtgcgagattatgccaaagggtta
gaagaaaacggtgatatagcaattaaattgcttgataacccgttagaaggcatgcaacaa
aaatccgatgaattccgttctcgaggcagtgagctatatcaccctgttcaagaggaaatc
taa
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