Photobacterium profundum: PBPRA0379
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Entry
PBPRA0379 CDS
T00173
Symbol
SF4267
Name
(GenBank) hypothetical outer membrane protein
KO
K07278
translocation and assembly module TamA
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppr02000
]
PBPRA0379 (SF4267)
Transporters [BR:
ppr02000
]
Other transporters
Pores ion channels [TC:
1
]
PBPRA0379 (SF4267)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
PG_binding_2
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
CAG18811
UniProt:
Q6LV64
LinkDB
All DBs
Position
1:377670..379406
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AA seq
578 aa
AA seq
DB search
MNDVLKRFGLTVVAMVFATPVLANTSLTIKGLKGNLQDNVDAYVSAIPKDDYSTTLRFRE
QLEDEIENALKALGYYQPIFTYEIKDDDKKSSIAVTVEKGPITHIAKSHIVLLGMAESDP
DFIGLVKGSGLGLGESLNHGKYESLKSSLSSLALRKGYFDASLTKSVMEVAPSRNEAFIT
IEFSSGRRYNFGDTTFTGSQIDEDRLQSLIPFEKDDPYLASKLGEFNQRLSTVGWFSSIF
VGGDVQHLDDGTVPIAVNLAPQVRNQIETGIGYSTDVGMRLKLNWKKPWLNSAGHSLSIK
TELSKVQPKIEAAYKIPLDDVLNDYYQVIGGIRYVDNHDTQSIEYNIGLERHWRLESDWK
RVASLRWLYEDYKQGVDKEGNGEKGILSMIIPGITYSKTRARGGAMPTWGDKQLISVEYA
DPALGSDTRLARFRGRSAWIRSAGENHRGILRLDGGAIVADRIEDVPPSMRFFAGGDNSI
RGYGYESIAPRNDGGLLVGGQYMATSTLEYQYRVYGDWWGAVFYDYGSAWISDPEWYSGT
GVGVRWASPVGPISIDFAWGLEKETDKFQLHFTLGPEL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgttttaaagcggtttggtttgaccgttgttgcgatggttttcgctacgcca
gtgttagcaaatacgtcgctaaccataaagggattaaaagggaatcttcaggataatgtg
gatgcttatgtttctgcgattcctaaagatgattacagtacaacgctgcgttttcgagag
caattggaagatgaaattgaaaatgcattaaaagcgttaggatactatcaaccaatattt
acctatgagattaaagacgacgataagaagtcatccatagccgttacggttgaaaaaggg
cctattacacatattgcgaaaagtcatattgtacttttaggtatggcagaaagtgatcct
gattttattggattggtgaaaggtagcggcttaggattaggcgaatcgttgaatcacggt
aaatatgaatccctcaaatcatcactttcaagtttagctttgcgtaaaggttactttgat
gcctctttaactaagagcgtaatggaagtcgccccctctcgtaatgaagctttcattacc
atcgaattttccagtggacgacgatataactttggtgacacgacgtttactggtagccaa
attgatgaagaccgattgcaatcgttgatcccatttgaaaaagatgacccgtatttagcc
tctaaattgggtgaatttaatcagcgtttatccaccgtcggttggttttcttcgattttt
gttggtggagatgtacagcatttagatgatggaactgtgcctattgctgtaaatttagct
cctcaagttcgtaatcaaattgaaacgggtatcggttattcaacagatgtcggtatgcgt
ttaaagcttaactggaagaagccttggctaaatagtgccgggcatagtctgagtattaaa
acagaactatcaaaggtgcagcctaaaattgaggccgcgtataaaattccacttgatgat
gttctgaatgattattatcaggtcattggtggtattcgttatgttgataatcacgatacg
caaagtatcgagtataacattggtctcgaaagacactggcggctcgaatcagattggaag
cgtgtagcttccctacgttggttatatgaagactataagcaaggcgttgataaggaaggg
aatggtgagaaaggcatcctaagtatgattattcctggtattacttatagcaaaacccgt
gccagaggtggcgcaatgccaacgtggggggataagcagttaatatcggttgaatatgcc
gatcctgctttaggttctgatacgcgtttagcaagatttcgtggtcgtagcgcttggatc
cgtagtgctggtgaaaatcatcgaggtatcttacgtctcgatggcggcgcgattgtggcc
gatagaattgaagatgtgccaccgtctatgcgtttctttgctggtggtgataatagtatt
cgagggtatggatatgaatcgattgctccgcgaaatgatggtggtttgctagtcggtggg
caatatatggcaacctcaacgctagagtatcaataccgcgtatatggggattggtggggc
gcggtattctacgactatggttcggcatggatcagtgaccctgaatggtatagcggtact
ggtgttggcgttcgttgggcatcccctgtaggtcctattagtattgattttgcttggggg
cttgagaaagaaacagacaagttccagctccactttactctgggacctgaattatga
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integrated database retrieval system
