Photobacterium profundum: PBPRA0611
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Entry
PBPRA0611 CDS
T00173
Symbol
T3205
Name
(GenBank) putative transcription pausing L factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppr03021
]
PBPRA0611 (T3205)
03009 Ribosome biogenesis [BR:
ppr03009
]
PBPRA0611 (T3205)
Transcription machinery [BR:
ppr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PBPRA0611 (T3205)
Ribosome biogenesis [BR:
ppr03009
]
Prokaryotic type
rRNA transcription factors
PBPRA0611 (T3205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
DUF4332
KH_NusA_C
S1
DUF2187
KH_KhpA-B
MRP-S35
Glyoxalase_4
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
CAG19032
UniProt:
Q6LUJ3
LinkDB
All DBs
Position
1:666215..667702
Genome browser
AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKAVPRERIFEALEIALATATKKKHEAEIDVRVAIDRKTGQVATFR
RWLAVDEVTQPTLEMTIEAAQYDDETIELGGFVEDEIESVTFDRITTQTAKQVIVQKVRE
AEREQIVEQFMDNEGELITGIVKKVNRDAVIIDLGNNAEAVIQRDDQLPRENFRSGDRIR
GLLYAVRPEARGFQLFMTRSKAEMLLELFRIEVPEIGEELIELMGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELAGERIDIVLWDENAAQYVINAMAPAEVASIIVDE
DSHTMDIAVEKDNLAQAIGRSGQNIRLASQLTGWELNVMTVEDLQKKHKEEAQVSIDTFT
KYLDIDEDFATLLVQEGFTTLEEIAYVPVSELMDVEGLDEDAINELRKCAKEALTTLALA
QEESFEGVEPAADLLGLDGLERELAFRLAAKGICTLEDLADQGTDDLLDLEEMGEAKAGE
LIMAARNICWFSDEA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaatcttggctgtcgttgaagcggtatccaatgaaaaagctgttcctcgt
gagcgtatctttgaagcactagagatcgcactggcaacagcaacaaagaaaaaacacgaa
gcagaaattgatgttcgtgttgctatcgatcgtaagacgggccaagttgcaacattccgt
cgttggcttgctgttgacgaagtcactcaaccgacattagaaatgacgattgaagcggca
cagtacgatgatgaaaccatcgaacttggtggatttgttgaagacgaaatcgaatcagta
acattcgaccgcattacaacacaaactgctaagcaagtaatcgtacagaaagtacgtgaa
gctgaacgcgagcaaattgttgagcagtttatggataacgaaggtgagttaatcactggt
atcgttaaaaaagtaaaccgtgatgcagtaattattgatttaggtaataatgcagaagcc
gtaatccaacgtgatgatcagcttcctcgtgaaaacttccgttcaggtgaccgtattcgt
ggtcttttatacgcagtgcgtcctgaagcgcgtggtttccaattgttcatgacacgttct
aaagcagaaatgttgttagaactattccgcattgaagtgccagaaatcggtgaagagctg
attgaactaatgggcgcggctcgcgatcctggttcacgtgcgaaaattgcagtgaaaacg
aacgacaaacgtattgacccagttggtgcgtgtgttggtatgcgtggcgcacgagtacaa
gccgtttctagtgaacttgctggtgagcgtattgatatcgttctttgggacgaaaacgca
gcacagtatgttatcaacgcaatggcgcctgctgaagttgcttcaatcattgttgatgaa
gatagccacacaatggacattgctgttgagaaagataatcttgctcaagcaattggtcgt
agtggtcagaatatccgtttagcatcacagcttactggctgggaactaaatgtaatgact
gtagaagatctacagaagaagcacaaagaagaagcacaagtatcgattgatacgtttact
aaatacctagacattgatgaagacttcgcgacgctattggttcaagaaggcttcacaaca
ctagaagaaatcgcttacgttcctgttagcgagcttatggatgttgaaggtcttgatgaa
gacgcaattaatgagctacgtaagtgtgcgaaagaagcactgactacgcttgcccttgcg
caagaagaatcatttgaaggtgtggagcctgcagctgatcttcttggtcttgacggttta
gagcgtgaattggcgtttaggctagctgcgaaaggtatttgtacgctggaagatcttgct
gaccaaggcacagatgatttgctcgatctcgaagagatgggcgaagcaaaagcgggtgag
cttattatggctgcgcgtaatatttgttggtttagcgacgaagcgtaa
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