Photobacterium profundum: PBPRA0614
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Entry
PBPRA0614 CDS
T00173
Symbol
EBIG1690
Name
(GenBank) putative tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppr03016
]
PBPRA0614 (EBIG1690)
Enzymes [BR:
ppr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PBPRA0614 (EBIG1690)
Transfer RNA biogenesis [BR:
ppr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PBPRA0614 (EBIG1690)
Prokaryotic type
PBPRA0614 (EBIG1690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CAG19035
UniProt:
Q6LUJ0
LinkDB
All DBs
Position
1:670958..671908
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AA seq
316 aa
AA seq
DB search
MARRRKGRPIDGVILLDKPTGITSNDTLQKVKRIFFAQKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETREVKVDRGQLERCIAKFRGTTDQ
IPSMFSALKYQGRPLYEYAREGIEIPRESRKITVHSIELLRFEGHEVEMEVHCSKGTYIR
TITDDLGEMLGCGAHVVYLRRTGVSDYPMENVVTLEQLQALRDQAIEQGIEPGELLDPLL
LPTDSAVQDLPEANVTVEGGDAILHGQPVKASQLPEQGTLVRITVGEQRDFIGIGEIDQN
NMVAPKRVMANKQDEA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgtcgtaagggtcgtccaatcgatggagttattcttctcgataaaccaacc
ggaattacttcgaatgatacgctgcaaaaagtaaagcgtatcttctttgctcaaaaagcg
ggtcatactggagcgctagatccattagcaacaggtatgctgccgatttgttttggtgaa
gcgacgaagttttctcaatttttgttggattcagataagcgctaccgtgtaattgcaaaa
ttaggtgagcgtacaaatacatctgactctgatggtgaagttgttgaaacgcgtgaagtg
aaagttgaccgtggtcagcttgagcgttgtatcgctaagttccgtggcacgactgaccag
atcccttcaatgttttcagcattgaagtatcaaggtcgccctctttatgaatatgcccgt
gaaggtatcgaaattcctcgtgaatctcgtaaaatcaccgttcactctattgagcttctt
cgttttgaaggtcatgaagttgaaatggaagtgcattgttcaaaagggacttacattcgt
actattaccgatgaccttggtgaaatgctgggttgtggcgcacacgttgtatatttacgt
cgtaccggtgtgtctgactacccgatggaaaacgttgttaccttagaacaacttcaagca
ttgcgtgatcaagcaatagagcaaggtattgaacctggcgaattacttgatccactattg
ttaccgacagattctgcagtacaagatttgccagaggcgaatgttactgttgaaggtggc
gatgctattttgcacggccagccagtaaaagcgagccaattaccagaacaaggtacatta
gttcgcattaccgttggggaacaacgtgacttcattggtattggtgaaatagaccaaaac
aatatggttgcacctaaacgtgttatggctaacaagcaagacgaagcataa
DBGET
integrated database retrieval system
