Photobacterium profundum: PBPRA0807
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Entry
PBPRA0807 CDS
T00173
Symbol
XSEB
Name
(GenBank) putative exodeoxyribonuclease, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppr
Photobacterium profundum
Pathway
ppr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PBPRA0807 (XSEB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppr03400
]
PBPRA0807 (XSEB)
Enzymes [BR:
ppr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PBPRA0807 (XSEB)
DNA repair and recombination proteins [BR:
ppr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PBPRA0807 (XSEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
CAG19220
UniProt:
Q6LU05
LinkDB
All DBs
Position
1:complement(894781..895023)
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AA seq
80 aa
AA seq
DB search
MAAKKPENMAFEAALDELDSIVNELESGDIALEDALKKFERGIMLARTSQKKLTQAEQRV
EILLQADDEAPLTEFNENNE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaaaaaaccagaaaatatggcatttgaagcagcattagatgaactcgattcc
attgtaaacgagttagagtctggtgatattgcactcgaagatgcactaaagaaatttgaa
cgtggcattatgcttgctcgcactagtcagaaaaaactaacacaagcagaacagcgtgta
gaaatattacttcaagctgatgatgaagcaccactgactgaatttaatgagaacaatgaa
taa
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